#!/bin/bash
  
  # Copyright 2014  Guoguo Chen, 2015 GoVivace Inc. (Nagendra Goel)
  #           2017  Vimal Manohar
  # Apache 2.0
  
  # Some basic error checking, similar to steps/decode.sh is added.
  
  set -e
  set -o pipefail
  
  # Begin configuration section.
  transform_dir=   # this option won't normally be used, but it can be used if you
                   # want to supply existing fMLLR transforms when decoding.
  iter=
  model= # You can specify the model to use (e.g. if you want to use the .alimdl)
  stage=0
  nj=4
  cmd=run.pl
  max_active=7000
  beam=13.0
  lattice_beam=6.0
  acwt=0.083333 # note: only really affects pruning (scoring is on lattices).
  num_threads=1 # if >1, will use gmm-latgen-faster-parallel
  parallel_opts=  # ignored now.
  scoring_opts=
  allow_partial=true
  # note: there are no more min-lmwt and max-lmwt options, instead use
  # e.g. --scoring-opts "--min-lmwt 1 --max-lmwt 20"
  skip_scoring=false
  # End configuration section.
  
  echo "$0 $@"  # Print the command line for logging
  
  [ -f ./path.sh ] && . ./path.sh; # source the path.
  . parse_options.sh || exit 1;
  
  if [ $# != 3 ]; then
     echo "$0: This is a special decoding script for segmentation where we"
     echo "use one decoding graph per segment. We assume a file HCLG.fsts.scp exists"
     echo "which is the scp file of the graphs for each segment."
     echo "This will normally be obtained by steps/cleanup/make_biased_lm_graphs.sh."
     echo "This script does not estimate fMLLR transforms; you have to use"
     echo "the --transform-dir option if you want to use fMLLR."
     echo ""
     echo "Usage: $0 [options] <graph-dir> <data-dir> <decode-dir>"
     echo " e.g.: $0 exp/tri2b/graph_train_si284_split \\"
     echo "             data/train_si284_split exp/tri2b/decode_train_si284_split"
     echo ""
     echo "where <decode-dir> is assumed to be a sub-directory of the directory"
     echo "where the model is."
     echo ""
     echo "main options (for others, see top of script file)"
     echo "  --config <config-file>                           # config containing options"
     echo "  --nj <nj>                                        # number of parallel jobs"
     echo "  --iter <iter>                                    # Iteration of model to test."
     echo "  --model <model>                                  # which model to use (e.g. to"
     echo "                                                   # specify the final.alimdl)"
     echo "  --cmd (utils/run.pl|utils/queue.pl <queue opts>) # how to run jobs."
     echo "  --transform-dir <trans-dir>                      # dir to find fMLLR transforms "
     echo "  --acwt <float>                                   # acoustic scale used for lattice generation "
     echo "  --scoring-opts <string>                          # options to local/score.sh"
     echo "  --num-threads <n>                                # number of threads to use, default 1."
     exit 1;
  fi
  
  
  graphdir=$1
  data=$2
  dir=$3
  
  mkdir -p $dir/log
  
  if [ -e $dir/final.mdl ]; then
    srcdir=$dir
  elif [ -e $dir/../final.mdl ]; then
    srcdir=$(dirname $dir)
  else
    echo "$0: expected either $dir/final.mdl or $dir/../final.mdl to exist"
    exit 1
  fi
  sdata=$data/split$nj;
  
  [[ -d $sdata && $data/feats.scp -ot $sdata ]] || split_data.sh $data $nj || exit 1;
  echo $nj > $dir/num_jobs
  
  if [ -z "$model" ]; then # if --model <mdl> was not specified on the command line...
    if [ -z $iter ]; then model=$srcdir/final.mdl;
    else model=$srcdir/$iter.mdl; fi
  fi
  
  if [ $(basename $model) != final.alimdl ] ; then
    # Do not use the $srcpath -- look at the path where the model is
    if [ -f $(dirname $model)/final.alimdl ] && [ -z "$transform_dir" ]; then
      echo -e '
  
  '
      echo $0 'WARNING: Running speaker independent system decoding using a SAT model!'
      echo $0 'WARNING: This is OK if you know what you are doing...'
      echo -e '
  
  '
    fi
  fi
  
  for f in $sdata/1/feats.scp $sdata/1/cmvn.scp $model $graphdir/HCLG.fsts.scp; do
    [ ! -f $f ] && echo "$0: no such file $f" && exit 1;
  done
  
  utils/lang/check_phones_compatible.sh $graphdir/phones.txt $srcdir/phones.txt
  
  # Split HCLG.fsts.scp by input utterance
  n1=$(cat $graphdir/HCLG.fsts.scp | wc -l)
  n2=$(cat $data/feats.scp | wc -l)
  if [ $n1 != $n2 ]; then
    echo "$0: expected $n2 graphs in $graphdir/HCLG.fsts.scp, got $n1"
  fi
  
  
  mkdir -p $dir/split_fsts
  sort -k1,1 $graphdir/HCLG.fsts.scp > $dir/HCLG.fsts.sorted.scp
  utils/filter_scps.pl --no-warn -f 1 JOB=1:$nj \
    $sdata/JOB/feats.scp $dir/HCLG.fsts.sorted.scp $dir/split_fsts/HCLG.fsts.JOB.scp
  HCLG=scp:$dir/split_fsts/HCLG.fsts.JOB.scp
  
  if [ -f $srcdir/final.mat ]; then feat_type=lda; else feat_type=delta; fi
  echo "$0: feature type is $feat_type";
  
  splice_opts=`cat $srcdir/splice_opts 2>/dev/null` || true # frame-splicing options.
  cmvn_opts=`cat $srcdir/cmvn_opts 2>/dev/null` || true
  delta_opts=`cat $srcdir/delta_opts 2>/dev/null` || true
  
  thread_string=
  [ $num_threads -gt 1 ] && thread_string="-parallel --num-threads=$num_threads"
  
  case $feat_type in
    delta) feats="ark,s,cs:apply-cmvn $cmvn_opts --utt2spk=ark:$sdata/JOB/utt2spk scp:$sdata/JOB/cmvn.scp scp:$sdata/JOB/feats.scp ark:- | add-deltas $delta_opts ark:- ark:- |";;
    lda) feats="ark,s,cs:apply-cmvn $cmvn_opts --utt2spk=ark:$sdata/JOB/utt2spk scp:$sdata/JOB/cmvn.scp scp:$sdata/JOB/feats.scp ark:- | splice-feats $splice_opts ark:- ark:- | transform-feats $srcdir/final.mat ark:- ark:- |";;
    *) echo "Invalid feature type $feat_type" && exit 1;
  esac
  if [ ! -z "$transform_dir" ]; then # add transforms to features...
    echo "Using fMLLR transforms from $transform_dir"
    [ ! -f $transform_dir/trans.1 ] && echo "Expected $transform_dir/trans.1 to exist" && exit 1
    [ ! -s $transform_dir/num_jobs ] && \
      echo "$0: expected $transform_dir/num_jobs to contain the number of jobs." && exit 1;
    nj_orig=$(cat $transform_dir/num_jobs)
    if [ $nj -ne $nj_orig ]; then
      # Copy the transforms into an archive with an index.
      echo "$0: num-jobs for transforms mismatches, so copying them."
      for n in $(seq $nj_orig); do cat $transform_dir/trans.$n; done | \
         copy-feats ark:- ark,scp:$dir/trans.ark,$dir/trans.scp || exit 1;
      feats="$feats transform-feats --utt2spk=ark:$sdata/JOB/utt2spk scp:$dir/trans.scp ark:- ark:- |"
    else
      # number of jobs matches with alignment dir.
      feats="$feats transform-feats --utt2spk=ark:$sdata/JOB/utt2spk ark:$transform_dir/trans.JOB ark:- ark:- |"
    fi
  fi
  
  if [ $stage -le 0 ]; then
    if [ -f "$graphdir/num_pdfs" ]; then
      [ "`cat $graphdir/num_pdfs`" -eq `am-info --print-args=false $model | grep pdfs | awk '{print $NF}'` ] || \
        { echo "Mismatch in number of pdfs with $model"; exit 1; }
    fi
    $cmd --num-threads $num_threads JOB=1:$nj $dir/log/decode.JOB.log \
      gmm-latgen-faster$thread_string --max-active=$max_active --beam=$beam --lattice-beam=$lattice_beam \
      --acoustic-scale=$acwt --allow-partial=$allow_partial --word-symbol-table=$graphdir/words.txt \
      $model "$HCLG" "$feats" "ark:|gzip -c > $dir/lat.JOB.gz" || exit 1;
  fi
  
  if ! $skip_scoring ; then
    [ ! -x local/score.sh ] && \
      echo "$0: Not scoring because local/score.sh does not exist or not executable." && exit 1;
    local/score.sh --cmd "$cmd" $scoring_opts $data $graphdir $dir ||
      { echo "$0: Scoring failed. (ignore by '--skip-scoring true')"; exit 1; }
  fi
  
  exit 0;