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egs/wsj/s5/steps/nnet2/train_pnorm.sh
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#!/bin/bash # Copyright 2012 Johns Hopkins University (Author: Daniel Povey). # 2013 Xiaohui Zhang # 2013 Guoguo Chen # 2014 Vimal Manohar # Apache 2.0. # This script trains neural network with pnorm nonlinearities. # The difference with train_tanh.sh is that, instead of setting # hidden_layer_size, you should set pnorm_input_dim and pnorm_output_dim. # Also the P value (the order of the p-norm) should be set. # # [Vimal Manohar - Oct 2014] # The script now supports realignment during training, which can be done by # specifying realign_epochs. # Begin configuration section. cmd=run.pl num_epochs=15 # Number of epochs during which we reduce # the learning rate; number of iteration is worked out from this. num_epochs_extra=5 # Number of epochs after we stop reducing # the learning rate. num_iters_final=20 # Maximum number of final iterations to give to the # optimization over the validation set. initial_learning_rate=0.04 final_learning_rate=0.004 bias_stddev=0.5 softmax_learning_rate_factor=1.0 # In the default setting keep the same learning rate. combine_regularizer=1.0e-14 # Small regularizer so that parameters won't go crazy. pnorm_input_dim=3000 pnorm_output_dim=300 p=2 minibatch_size=128 # by default use a smallish minibatch size for neural net # training; this controls instability which would otherwise # be a problem with multi-threaded update. Note: it also # interacts with the "preconditioned" update which generally # works better with larger minibatch size, so it's not # completely cost free. samples_per_iter=200000 # each iteration of training, see this many samples # per job. This option is passed to get_egs.sh num_jobs_nnet=16 # Number of neural net jobs to run in parallel. This option # is passed to get_egs.sh. get_egs_stage=0 shuffle_buffer_size=5000 # This "buffer_size" variable controls randomization of the samples # on each iter. You could set it to 0 or to a large value for complete # randomization, but this would both consume memory and cause spikes in # disk I/O. Smaller is easier on disk and memory but less random. It's # not a huge deal though, as samples are anyway randomized right at the start. add_layers_period=2 # by default, add new layers every 2 iterations. num_hidden_layers=3 stage=-5 io_opts="--max-jobs-run 5" # for jobs with a lot of I/O, limits the number running at one time. splice_width=4 # meaning +- 4 frames on each side for second LDA randprune=4.0 # speeds up LDA. alpha=4.0 max_change=10.0 mix_up=0 # Number of components to mix up to (should be > #tree leaves, if # specified.) num_threads=16 parallel_opts="--num-threads 16 --mem 1G" # by default we use 16 threads; this lets the queue know. # note: parallel_opts doesn't automatically get adjusted if you adjust num-threads. cleanup=true egs_dir= lda_opts= lda_dim= egs_opts= transform_dir= # If supplied, overrides alidir cmvn_opts= # will be passed to get_lda.sh and get_egs.sh, if supplied. # only relevant for "raw" features, not lda. feat_type= # Can be used to force "raw" features. prior_subset_size=10000 # 10k samples per job, for computing priors. Should be # more than enough. align_cmd= # The cmd that is passed to steps/nnet2/align.sh align_use_gpu= # Passed to use_gpu in steps/nnet2/align.sh [yes/no] realign_epochs= # List of epochs, the beginning of which realignment is done num_jobs_align=30 # Number of jobs for realignment # End configuration section. echo "$0 $@" # Print the command line for logging if [ -f path.sh ]; then . ./path.sh; fi . parse_options.sh || exit 1; if [ $# != 4 ]; then echo "Usage: $0 [opts] <data> <lang> <ali-dir> <exp-dir>" echo " e.g.: $0 data/train data/lang exp/tri3_ali exp/tri4_nnet" echo "" echo "Main options (for others, see top of script file)" echo " --config <config-file> # config file containing options" echo " --cmd (utils/run.pl|utils/queue.pl <queue opts>) # how to run jobs." echo " --num-epochs <#epochs|15> # Number of epochs of main training" echo " # while reducing learning rate (determines #iterations, together" echo " # with --samples-per-iter and --num-jobs-nnet)" echo " --num-epochs-extra <#epochs-extra|5> # Number of extra epochs of training" echo " # after learning rate fully reduced" echo " --initial-learning-rate <initial-learning-rate|0.02> # Learning rate at start of training, e.g. 0.02 for small" echo " # data, 0.01 for large data" echo " --final-learning-rate <final-learning-rate|0.004> # Learning rate at end of training, e.g. 0.004 for small" echo " # data, 0.001 for large data" echo " --num-hidden-layers <#hidden-layers|2> # Number of hidden layers, e.g. 2 for 3 hours of data, 4 for 100hrs" echo " --add-layers-period <#iters|2> # Number of iterations between adding hidden layers" echo " --mix-up <#pseudo-gaussians|0> # Can be used to have multiple targets in final output layer," echo " # per context-dependent state. Try a number several times #states." echo " --num-jobs-nnet <num-jobs|8> # Number of parallel jobs to use for main neural net" echo " # training (will affect results as well as speed; try 8, 16)" echo " # Note: if you increase this, you may want to also increase" echo " # the learning rate." echo " --num-threads <num-threads|16> # Number of parallel threads per job (will affect results" echo " # as well as speed; may interact with batch size; if you increase" echo " # this, you may want to decrease the batch size." echo " --parallel-opts <opts|\"--num-threads 16 --mem 1G\"> # extra options to pass to e.g. queue.pl for processes that" echo " # use multiple threads... " echo " --io-opts <opts|\"--max-jobs-run 10\"> # Options given to e.g. queue.pl for jobs that do a lot of I/O." echo " --minibatch-size <minibatch-size|128> # Size of minibatch to process (note: product with --num-threads" echo " # should not get too large, e.g. >2k)." echo " --samples-per-iter <#samples|400000> # Number of samples of data to process per iteration, per" echo " # process." echo " --splice-width <width|4> # Number of frames on each side to append for feature input" echo " # (note: we splice processed, typically 40-dimensional frames" echo " --lda-dim <dim|250> # Dimension to reduce spliced features to with LDA" echo " --num-iters-final <#iters|20> # Number of final iterations to give to nnet-combine-fast to " echo " # interpolate parameters (the weights are learned with a validation set)" echo " --egs-opts <opts> # Extra options to pass to get_egs.sh" echo " --lda-opts <opts> # Extra options to pass to get_lda.sh" echo " --realign-epochs <list-of-epochs|\"\"> # A list of space-separated epoch indices the beginning of which" echo " # realignment is to be done" echo " --align-cmd (utils/run.pl|utils/queue.pl <queue opts>) # passed to align.sh" echo " --align-use-gpu (yes/no) # specify is gpu is to be used for realignment" echo " --num-jobs-align <#njobs|30> # Number of jobs to perform realignment" echo " --stage <stage|-9> # Used to run a partially-completed training process from somewhere in" echo " # the middle." exit 1; fi data=$1 lang=$2 alidir=$3 dir=$4 if [ ! -z "$realign_epochs" ]; then [ -z "$align_cmd" ] && echo "$0: realign_epochs specified but align_cmd not specified" && exit 1 [ -z "$align_use_gpu" ] && echo "$0: realign_epochs specified but align_use_gpu not specified" && exit 1 fi # Check some files. for f in $data/feats.scp $lang/L.fst $alidir/ali.1.gz $alidir/final.mdl $alidir/tree; do [ ! -f $f ] && echo "$0: no such file $f" && exit 1; done # Set some variables. num_leaves=`tree-info $alidir/tree 2>/dev/null | grep num-pdfs | awk '{print $2}'` || exit 1 [ -z $num_leaves ] && echo "\$num_leaves is unset" && exit 1 [ "$num_leaves" -eq "0" ] && echo "\$num_leaves is 0" && exit 1 nj=`cat $alidir/num_jobs` || exit 1; # number of jobs in alignment dir... # in this dir we'll have just one job. sdata=$data/split$nj utils/split_data.sh $data $nj mkdir -p $dir/log echo $nj > $dir/num_jobs cp $alidir/tree $dir utils/lang/check_phones_compatible.sh $lang/phones.txt $alidir/phones.txt || exit 1; cp $lang/phones.txt $dir || exit 1; extra_opts=() [ ! -z "$cmvn_opts" ] && extra_opts+=(--cmvn-opts "$cmvn_opts") [ ! -z "$feat_type" ] && extra_opts+=(--feat-type $feat_type) [ ! -z "$online_ivector_dir" ] && extra_opts+=(--online-ivector-dir $online_ivector_dir) [ -z "$transform_dir" ] && transform_dir=$alidir extra_opts+=(--transform-dir $transform_dir) extra_opts+=(--splice-width $splice_width) if [ $stage -le -4 ]; then echo "$0: calling get_lda.sh" steps/nnet2/get_lda.sh $lda_opts "${extra_opts[@]}" --cmd "$cmd" $data $lang $alidir $dir || exit 1; fi # these files will have been written by get_lda.sh feat_dim=`cat $dir/feat_dim` || exit 1; lda_dim=`cat $dir/lda_dim` || exit 1; if [ $stage -le -3 ] && [ -z "$egs_dir" ]; then echo "$0: calling get_egs.sh" steps/nnet2/get_egs.sh $egs_opts "${extra_opts[@]}" \ --samples-per-iter $samples_per_iter \ --num-jobs-nnet $num_jobs_nnet --stage $get_egs_stage \ --cmd "$cmd" $egs_opts --io-opts "$io_opts" \ $data $lang $alidir $dir || exit 1; fi if [ -z $egs_dir ]; then egs_dir=$dir/egs fi iters_per_epoch=`cat $egs_dir/iters_per_epoch` || exit 1; ! [ $num_jobs_nnet -eq `cat $egs_dir/num_jobs_nnet` ] && \ echo "$0: Warning: using --num-jobs-nnet=`cat $egs_dir/num_jobs_nnet` from $egs_dir" num_jobs_nnet=`cat $egs_dir/num_jobs_nnet` || exit 1; if ! [ $num_hidden_layers -ge 1 ]; then echo "Invalid num-hidden-layers $num_hidden_layers" exit 1 fi if [ $stage -le -2 ]; then echo "$0: initializing neural net"; lda_mat=$dir/lda.mat ext_lda_dim=$lda_dim ext_feat_dim=$feat_dim stddev=`perl -e "print 1.0/sqrt($pnorm_input_dim);"` cat >$dir/nnet.config <<EOF SpliceComponent input-dim=$ext_feat_dim left-context=$splice_width right-context=$splice_width FixedAffineComponent matrix=$lda_mat AffineComponentPreconditioned input-dim=$ext_lda_dim output-dim=$pnorm_input_dim alpha=$alpha max-change=$max_change learning-rate=$initial_learning_rate param-stddev=$stddev bias-stddev=$bias_stddev PnormComponent input-dim=$pnorm_input_dim output-dim=$pnorm_output_dim p=$p NormalizeComponent dim=$pnorm_output_dim AffineComponentPreconditioned input-dim=$pnorm_output_dim output-dim=$num_leaves alpha=$alpha max-change=$max_change learning-rate=$initial_learning_rate param-stddev=0 bias-stddev=0 SoftmaxComponent dim=$num_leaves EOF # to hidden.config it will write the part of the config corresponding to a # single hidden layer; we need this to add new layers. cat >$dir/hidden.config <<EOF AffineComponentPreconditioned input-dim=$pnorm_output_dim output-dim=$pnorm_input_dim alpha=$alpha max-change=$max_change learning-rate=$initial_learning_rate param-stddev=$stddev bias-stddev=$bias_stddev PnormComponent input-dim=$pnorm_input_dim output-dim=$pnorm_output_dim p=$p NormalizeComponent dim=$pnorm_output_dim EOF $cmd $dir/log/nnet_init.log \ nnet-am-init $alidir/tree $lang/topo "nnet-init $dir/nnet.config -|" \ $dir/0.mdl || exit 1; fi if [ $stage -le -1 ]; then echo "Training transition probabilities and setting priors" $cmd $dir/log/train_trans.log \ nnet-train-transitions $dir/0.mdl "ark:gunzip -c $alidir/ali.*.gz|" $dir/0.mdl \ || exit 1; fi num_iters_reduce=$[$num_epochs * $iters_per_epoch]; num_iters_extra=$[$num_epochs_extra * $iters_per_epoch]; num_iters=$[$num_iters_reduce+$num_iters_extra] echo "$0: Will train for $num_epochs + $num_epochs_extra epochs, equalling " echo "$0: $num_iters_reduce + $num_iters_extra = $num_iters iterations, " echo "$0: (while reducing learning rate) + (with constant learning rate)." # This is when we decide to mix up from: halfway between when we've finished # adding the hidden layers and the end of training. finish_add_layers_iter=$[$num_hidden_layers * $add_layers_period] mix_up_iter=$[($num_iters + $finish_add_layers_iter)/2] if [ $num_threads -eq 1 ]; then train_suffix="-simple" # this enables us to use GPU code if # we have just one thread. if ! cuda-compiled; then echo "$0: WARNING: you are running with one thread but you have not compiled" echo " for CUDA. You may be running a setup optimized for GPUs. If you have" echo " GPUs and have nvcc installed, go to src/ and do ./configure; make" fi else train_suffix="-parallel --num-threads=$num_threads" fi x=0 for realign_epoch in $realign_epochs; do realign_iter=`perl -e 'print int($ARGV[0] * $ARGV[1]);' $realign_epoch $iters_per_epoch` realign_this_iter[$realign_iter]=$realign_epoch done cur_egs_dir=$egs_dir while [ $x -lt $num_iters ]; do if [ ! -z "${realign_this_iter[$x]}" ]; then prev_egs_dir=$cur_egs_dir cur_egs_dir=$dir/egs_${realign_this_iter[$x]} fi if [ $x -ge 0 ] && [ $stage -le $x ]; then if [ ! -z "${realign_this_iter[$x]}" ]; then epoch=${realign_this_iter[$x]} echo "Getting average posterior for purposes of adjusting the priors." # Note: this just uses CPUs, using a smallish subset of data. rm $dir/post.*.vec 2>/dev/null $cmd JOB=1:$num_jobs_nnet $dir/log/get_post.JOB.log \ nnet-subset-egs --n=$prior_subset_size ark:$prev_egs_dir/egs.JOB.0.ark ark:- \| \ nnet-compute-from-egs "nnet-to-raw-nnet $dir/$x.mdl -|" ark:- ark:- \| \ matrix-sum-rows ark:- ark:- \| vector-sum ark:- $dir/post.JOB.vec || exit 1; sleep 3; # make sure there is time for $dir/post.*.vec to appear. $cmd $dir/log/vector_sum.log \ vector-sum $dir/post.*.vec $dir/post.vec || exit 1; rm $dir/post.*.vec; echo "Re-adjusting priors based on computed posteriors" $cmd $dir/log/adjust_priors.$x.log \ nnet-adjust-priors $dir/$x.mdl $dir/post.vec $dir/$x.mdl || exit 1; sleep 2 steps/nnet2/align.sh --nj $num_jobs_align --cmd "$align_cmd" --use-gpu $align_use_gpu \ --transform-dir "$transform_dir" \ --iter $x $data $lang $dir $dir/ali_$epoch || exit 1 steps/nnet2/relabel_egs.sh --cmd "$cmd" --iter $x $dir/ali_$epoch \ $prev_egs_dir $cur_egs_dir || exit 1 if $cleanup && [[ $prev_egs_dir =~ $dir/egs* ]]; then steps/nnet2/remove_egs.sh $prev_egs_dir fi fi # Set off jobs doing some diagnostics, in the background. # Use the egs dir from the previous iteration for the diagnostics $cmd $dir/log/compute_prob_valid.$x.log \ nnet-compute-prob $dir/$x.mdl ark:$cur_egs_dir/valid_diagnostic.egs & $cmd $dir/log/compute_prob_train.$x.log \ nnet-compute-prob $dir/$x.mdl ark:$cur_egs_dir/train_diagnostic.egs & if [ $x -gt 0 ] && [ ! -f $dir/log/mix_up.$[$x-1].log ]; then $cmd $dir/log/progress.$x.log \ nnet-show-progress --use-gpu=no $dir/$[$x-1].mdl $dir/$x.mdl \ ark:$cur_egs_dir/train_diagnostic.egs '&&' \ nnet-am-info $dir/$x.mdl & fi echo "Training neural net (pass $x)" if [ $x -gt 0 ] && \ [ $x -le $[($num_hidden_layers-1)*$add_layers_period] ] && \ [ $[($x-1) % $add_layers_period] -eq 0 ]; then mdl="nnet-init --srand=$x $dir/hidden.config - | nnet-insert $dir/$x.mdl - - |" else mdl=$dir/$x.mdl fi $cmd $parallel_opts JOB=1:$num_jobs_nnet $dir/log/train.$x.JOB.log \ nnet-shuffle-egs --buffer-size=$shuffle_buffer_size --srand=$x \ ark:$cur_egs_dir/egs.JOB.$[$x%$iters_per_epoch].ark ark:- \| \ nnet-train$train_suffix \ --minibatch-size=$minibatch_size --srand=$x "$mdl" \ ark:- $dir/$[$x+1].JOB.mdl \ || exit 1; nnets_list= for n in `seq 1 $num_jobs_nnet`; do nnets_list="$nnets_list $dir/$[$x+1].$n.mdl" done learning_rate=`perl -e '($x,$n,$i,$f)=@ARGV; print ($x >= $n ? $f : $i*exp($x*log($f/$i)/$n));' $[$x+1] $num_iters_reduce $initial_learning_rate $final_learning_rate`; softmax_learning_rate=`perl -e "print $learning_rate * $softmax_learning_rate_factor;"`; nnet-am-info $dir/$[$x+1].1.mdl > $dir/foo 2>/dev/null || exit 1 nu=`cat $dir/foo | grep num-updatable-components | awk '{print $2}'` na=`cat $dir/foo | grep -v Fixed | grep AffineComponent | wc -l` # na is number of last updatable AffineComponent layer [one-based, counting only # updatable components.] lr_string="$learning_rate" for n in `seq 2 $nu`; do if [ $n -eq $na ] || [ $n -eq $[$na-1] ]; then lr=$softmax_learning_rate; else lr=$learning_rate; fi lr_string="$lr_string:$lr" done $cmd $dir/log/average.$x.log \ nnet-am-average $nnets_list - \| \ nnet-am-copy --learning-rates=$lr_string - $dir/$[$x+1].mdl || exit 1; if [ "$mix_up" -gt 0 ] && [ $x -eq $mix_up_iter ]; then # mix up. echo Mixing up from $num_leaves to $mix_up components $cmd $dir/log/mix_up.$x.log \ nnet-am-mixup --min-count=10 --num-mixtures=$mix_up \ $dir/$[$x+1].mdl $dir/$[$x+1].mdl || exit 1; fi rm $nnets_list fi x=$[$x+1] done # Now do combination. # At the end, final.mdl will be a combination of the last e.g. 10 models. nnets_list=() if [ $num_iters_final -gt $num_iters_extra ]; then echo "Setting num_iters_final=$num_iters_extra" fi start=$[$num_iters-$num_iters_final+1] for x in `seq $start $num_iters`; do idx=$[$x-$start] if [ $x -gt $mix_up_iter ]; then nnets_list[$idx]=$dir/$x.mdl # "nnet-am-copy --remove-dropout=true $dir/$x.mdl - |" fi done if [ $stage -le $num_iters ]; then echo "Doing final combination to produce final.mdl" # Below, use --use-gpu=no to disable nnet-combine-fast from using a GPU, as # if there are many models it can give out-of-memory error; set num-threads to 8 # to speed it up (this isn't ideal...) this_num_threads=$num_threads [ $this_num_threads -lt 8 ] && this_num_threads=8 num_egs=`nnet-copy-egs ark:$cur_egs_dir/combine.egs ark:/dev/null 2>&1 | tail -n 1 | awk '{print $NF}'` mb=$[($num_egs+$this_num_threads-1)/$this_num_threads] [ $mb -gt 512 ] && mb=512 # Setting --initial-model to a large value makes it initialize the combination # with the average of all the models. It's important not to start with a # single model, or, due to the invariance to scaling that these nonlinearities # give us, we get zero diagonal entries in the fisher matrix that # nnet-combine-fast uses for scaling, which after flooring and inversion, has # the effect that the initial model chosen gets much higher learning rates # than the others. This prevents the optimization from working well. $cmd $parallel_opts $dir/log/combine.log \ nnet-combine-fast --initial-model=100000 --num-lbfgs-iters=40 --use-gpu=no \ --num-threads=$this_num_threads --regularizer=$combine_regularizer \ --verbose=3 --minibatch-size=$mb "${nnets_list[@]}" ark:$cur_egs_dir/combine.egs \ $dir/final.mdl || exit 1; # Normalize stddev for affine or block affine layers that are followed by a # pnorm layer and then a normalize layer. $cmd $parallel_opts $dir/log/normalize.log \ nnet-normalize-stddev $dir/final.mdl $dir/final.mdl || exit 1; # Compute the probability of the final, combined model with # the same subset we used for the previous compute_probs, as the # different subsets will lead to different probs. $cmd $dir/log/compute_prob_valid.final.log \ nnet-compute-prob $dir/final.mdl ark:$cur_egs_dir/valid_diagnostic.egs & $cmd $dir/log/compute_prob_train.final.log \ nnet-compute-prob $dir/final.mdl ark:$cur_egs_dir/train_diagnostic.egs & fi if [ $stage -le $[$num_iters+1] ]; then echo "Getting average posterior for purposes of adjusting the priors." # Note: this just uses CPUs, using a smallish subset of data. rm $dir/post.*.vec 2>/dev/null $cmd JOB=1:$num_jobs_nnet $dir/log/get_post.JOB.log \ nnet-subset-egs --n=$prior_subset_size ark:$cur_egs_dir/egs.JOB.0.ark ark:- \| \ nnet-compute-from-egs "nnet-to-raw-nnet $dir/final.mdl -|" ark:- ark:- \| \ matrix-sum-rows ark:- ark:- \| vector-sum ark:- $dir/post.JOB.vec || exit 1; sleep 3; # make sure there is time for $dir/post.*.vec to appear. $cmd $dir/log/vector_sum.log \ vector-sum $dir/post.*.vec $dir/post.vec || exit 1; rm $dir/post.*.vec; echo "Re-adjusting priors based on computed posteriors" $cmd $dir/log/adjust_priors.final.log \ nnet-adjust-priors $dir/final.mdl $dir/post.vec $dir/final.mdl || exit 1; fi sleep 2 echo Done if $cleanup; then echo Cleaning up data if [[ $cur_egs_dir =~ $dir/egs* ]]; then steps/nnet2/remove_egs.sh $cur_egs_dir fi echo Removing most of the models for x in `seq 0 $num_iters`; do if [ $[$x%100] -ne 0 ] && [ $x -lt $[$num_iters-$num_iters_final+1] ]; then # delete all but every 100th model; don't delete the ones which combine to form the final model. rm $dir/$x.mdl fi done fi |