// bin/get-post-on-ali.cc

// Copyright 2013  Brno University of Technology (Author: Karel Vesely)
//           2014  Johns Hopkins University (author: Daniel Povey)

// See ../../COPYING for clarification regarding multiple authors
//
// Licensed under the Apache License, Version 2.0 (the "License");
// you may not use this file except in compliance with the License.
// You may obtain a copy of the License at
//
//  http://www.apache.org/licenses/LICENSE-2.0
//
// THIS CODE IS PROVIDED *AS IS* BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
// KIND, EITHER EXPRESS OR IMPLIED, INCLUDING WITHOUT LIMITATION ANY IMPLIED
// WARRANTIES OR CONDITIONS OF TITLE, FITNESS FOR A PARTICULAR PURPOSE,
// MERCHANTABLITY OR NON-INFRINGEMENT.
// See the Apache 2 License for the specific language governing permissions and
// limitations under the License.


#include "base/kaldi-common.h"
#include "util/common-utils.h"
#include "gmm/am-diag-gmm.h"
#include "hmm/transition-model.h"
#include "hmm/hmm-utils.h"
#include "hmm/posterior.h"


int main(int argc, char *argv[]) {
  using namespace kaldi;
  typedef kaldi::int32 int32;
  try {
    const char *usage =
        "Given input posteriors, e.g. derived from lattice-to-post, and an alignment\n"
        "typically derived from the best path of a lattice, outputs the probability in\n"
        "the posterior of the corresponding index in the alignment, or zero if it was\n"
        "not there.  These are output as a vector of weights, one per utterance.\n"
        "While, by default, lattice-to-post (as a source of posteriors) and sources of\n"
        "alignments such as lattice-best-path will output transition-ids as the index,\n"
        "it will generally make sense to either convert these to pdf-ids using\n"
        "post-to-pdf-post and ali-to-pdf respectively, or to phones using post-to-phone-post\n"
        "and (ali-to-phones --per-frame=true).  Since this program only sees the integer\n"
        "indexes, it does not care what they represent-- but of course they should match\n"
        "(e.g. don't input posteriors with transition-ids and alignments with pdf-ids).\n"
        "See http://kaldi-asr.org/doc/hmm.html#transition_model_identifiers for an\n"
        "explanation of these types of indexes.\n"
        "\n"
        "See also: post-to-tacc, weight-post, post-to-weights, reverse-weights\n"
        "\n"
        "Usage:  get-post-on-ali [options] <posteriors-rspecifier> <ali-rspecifier> <weights-wspecifier>\n"
        "e.g.: get-post-on-ali ark:post.ark ark,s,cs:ali.ark ark:weights.ark\n";

    ParseOptions po(usage);

    po.Read(argc, argv);

    if (po.NumArgs() != 3) {
      po.PrintUsage();
      exit(1);
    }

    std::string posteriors_rspecifier = po.GetArg(1),
        alignments_rspecifier = po.GetArg(2),
        confidences_wspecifier = po.GetArg(3);

    int32 num_done = 0, num_no_alignment = 0;
    SequentialPosteriorReader posterior_reader(posteriors_rspecifier);
    RandomAccessInt32VectorReader alignments_reader(alignments_rspecifier);
    BaseFloatVectorWriter confidences_writer(confidences_wspecifier);

    for (; !posterior_reader.Done(); posterior_reader.Next()) {
      std::string key = posterior_reader.Key();
      if (!alignments_reader.HasKey(key)) {
        num_no_alignment++;
      } else {
        //get the posterior
        const kaldi::Posterior &posterior = posterior_reader.Value();
        int32 num_frames = static_cast<int32>(posterior.size());
        //get the alignment
        const std::vector<int32> &alignment = alignments_reader.Value(key);
        //check the lengths match
        KALDI_ASSERT(num_frames == alignment.size());

        //fill the vector with posteriors on the alignment (under the alignment path)
        Vector<BaseFloat> confidence(num_frames);
        for(int32 i = 0; i < num_frames; i++) {
          BaseFloat post_i = 0.0;
          for(int32 j = 0; j < posterior[i].size(); j++) {
            if(alignment[i] == posterior[i][j].first) {
              post_i = posterior[i][j].second;
              break;
            }
          }
          confidence(i) = post_i;
        }

        //write the vector with confidences
        confidences_writer.Write(key,confidence);
        num_done++;
      }
    }
    KALDI_LOG << "Done getting the posteriors under the alignment path for "
              << num_done << " utterances. " << num_no_alignment << " with missing alignments.";
    return 0;
  } catch(const std::exception &e) {
    std::cerr << e.what();
    return -1;
  }
}