\begin{document}
  
  
  \begin{Thesis}{
  	\subimport{frontmatter/}{remerciements}
  	\subimport{frontmatter/}{resume}
  	\subimport{frontmatter/}{abstract}
  	\subimport{frontmatter/}{introduction_generale}
  }{
  	\begin{appendices}
  	\subimport{annexes/}{content}	
  	\end{appendices}
  }
  	
   

   \subimport{introduction/}{content}
   
   
   
   % Partie 1
   \subimport{partie-1/}{content}
   
   % Partie 2
   \subimport{partie-2/}{content}
   
   
   
   
  \bookmarksetupnext{startatroot}
  
  \subimport{conclusion/}{content}
  
  	
  \end{Thesis}
  \end{document}