Commit 9f044abf8140238f65fa8520ce9a3f39ddd7543e
1 parent
8774b988e4
Exists in
master
Removed filter ids that is now available in volia.data module
Showing 1 changed file with 0 additions and 24 deletions Inline Diff
volia/filter_ids.py
| 1 | import argparse | File was deleted | |
| 2 | from os.path import isfile | ||
| 3 | #from volia.data_io import read_lst | ||
| 4 | |||
| 5 | import volia | ||
| 6 | if __name__ == "__main__": | ||
| 7 | parser = argparse.ArgumentParser(description="Filter ids of the given file to only keep a subset") | ||
| 8 | parser.add_argument("file", type=str, help="") | ||
| 9 | parser.add_argument("--filter", default=None, type=str, help="") | ||
| 10 | parser.add_argument("--outfile", default="out.txt", type=str, help="") | ||
| 11 | |||
| 12 | args = parser.parse_args() | ||
| 13 | |||
| 14 | assert args.filter is not None | ||
| 15 | assert isfile(args.file) | ||
| 16 | |||
| 17 | list_ = read_lst(args.file) | ||
| 18 | filter_ = read_lst(args.filter) | ||
| 19 | |||
| 20 | with open(args.outfile, "w") as of: | ||
| 21 | for key in filter_.keys(): | ||
| 22 | of.write(key + " " + " ".join(list_[key]) + "\n") | ||
| 23 | |||
| 24 | print("File filtered and written in: ", args.outfile) |