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lib/context.rb 10.7 KB
65040e3e6   Romain Deveaud   changes made for ...
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  #!/usr/bin/env ruby
  
  require 'mirimiri'
  require 'sanitize'
  require 'lda-ruby'
  require 'context/conceptual_element'
  require 'context/concept_model'
  require 'context/concept'
  require 'context/query_context'
  
  
  module Context
    @@count = Hash.new { |h,k| h[k] = {} }
    @@df    = Hash.new { |h,k| h[k] = {} }
    @@semaphore = Mutex.new
  
    IndexPaths = {
      :web_en        => '/mnt/disk2/ClueWeb09_English_1_sDocs',
      :web_fr        => '/mnt/disk2/ClueWeb09_French_1_sDocs',
      :web_nospam    => '/mnt/disk1/ClueWeb09_English_1noSpam',
      :robust        => '/mnt/disk5/Robust04/',
      :wt10g         => '/mnt/disk3/WT10g_index',
      :gov2          => '/mnt/disk3/GOV2_index',
      :gigaword      => '/local/data/GigaWord/index',
      :nyt           => '/local/data/NYT_index',
      :wiki_en       => '/local/data/WikiEn_index',
      :wiki_en2012   => '/local/data/WikiEn2012_index',
      :wiki_fr       => '/local/data/WikiFr_index',
      :wiki_tc2012   => '/local/data/INEXQA2012index',
      :books         => '/local/data/INEX/Books2011/indexedit',
      :ent           => '/home/sanjuan/works/nist_eval/csiro_indri.ind'
    }
  
    IndexPathsCaracole = {
      :web_en        => '/distant/index_clueweb/disk2/ClueWeb09_English_1_sDocs',
      :web_nospam    => '/distant/index_clueweb/disk1/ClueWeb09_English_1noSpam',
      :robust        => '/distant/data/Robust04',
      :wt10g         => '/distant/index_clueweb/disk3/WT10g_index',
      :gov2          => '/distant/index_clueweb/disk3/GOV2_index'
    }
  
    # #
    # From the SIGKDD 2007 paper : "Exploiting underrepresented query aspects for automatic query expansion"
    def Context.query_aspects q
      query = Mirimiri::Document.new q
  
      2.upto(query.words.count) do |size|
        query.ngrams(size).each do |s|
          dp = Context.count_w Context::IndexPaths[:wiki_en2012],"#1(#{s})"
          d  = Context.count_w Context::IndexPaths[:wiki_en2012],"#{s}",100000000 
          p s
  
          denum = s.split.permutation.inject(0.0) do |res,p|
            tmp = (p == s.split) ? 0 : Context.count_w(Context::IndexPaths[:wiki_en2012],"#1(#{p.join(" ")})")
            res + tmp
          end
  
          existence = dp.to_f/d
          support = dp.to_f/denum
          puts "#{s} ===> #{existence*support}"
        end
      end
    end
  
    # #
    # From the CIKM 2007 paper : "Ranking Very Many Typed Entities on Wikipedia"
    #
    # The ``entities`` parameter is currently an array of strings. Could be moved
    # to an array of Entity objects.
    def Context.entity_web_ranking query,entities,nbdocs=100,index='web_nospam'
      q = Indri::IndriQuery.new({:query => "#combine ( #{query} )", :count => nbdocs},"-trecFormat=true")
      indri_index = Indri::IndriIndex.new IndexPaths[index.to_sym]
      docs = indri_index.runquery(q).force_encoding("ISO-8859-1").encode("UTF-8")
      query_list = docs.split("
  ").collect { |p| p.scan(/\d+ Q0 (.+) \d+ -\d+.\d+ .+/).first }.flatten
  
      res = entities.pmap(15) do |e|
        eq = Indri::IndriQuery.new({:query => "#combine ( #{e.gsub(/[^a-zA-Z0-9\s]/,'')} )", :count => nbdocs},"-trecFormat=true")
        edocs = indri_index.runquery(eq).force_encoding("ISO-8859-1").encode("UTF-8") 
        e_list = edocs.split("
  ").collect { |p| p.scan(/\d+ Q0 (.+) \d+ -\d+.\d+ .+/).first }.flatten
  
        rels = e_list&query_list
  
        ave_p = 1.upto(nbdocs).inject(0.0) do |sum,k| 
          p = (e_list.first(k)&rels).count.to_f/k
          rel = rels.include?(e_list[k-1]) ? 1.0 : 0.0
          sum + p*rel
        end
  
        {:name => e, :score => ave_p}
      end
  
      res.sort { |a,b| b[:score] <=> a[:score] }
    end
  
    def Context.query_entities query,nb_docs=10
      sources = ['wiki_en2012']
  #    sources = ['wiki_en2012','web_nospam','nyt','gigaword']
  #    sources = ['web_fr']
      sc = Hash.new { |h,k| h[k] = 0.0 }
  
      sources.each do |source|
        puts " == source : #{source}"
        c = ConceptModel.new query,source,nb_docs
        p c.query
  
        c.concepts.each do |concept|
          querys = concept.words[0,4].join " "
  
          d1 = Context::label_candidate querys.sequential_dependence_model,'wiki_en'
          d2 = Context::label_candidate querys.sequential_dependence_model,'wiki_en2012'
          d3 = Mirimiri::WikipediaPage.search_wikipedia_titles querys
  
          d1 = [] if d1.nil?
          d2 = [] if d2.nil?
          d3 = [] if d3.nil?
  
          d =  d2 & d3
          labels = d.collect { |c| c.downcase.gsub(/[^\w\d]/,' ') }
          p d
  
  
          mins = -10000000
          lab = nil
          scores = labels.collect do |l|
            s = concept.score_label l 
            if s > mins
              mins = s
              lab = l
            end
            sc[l] += s*(concept.coherence/c.total_coherence)
            { :label => l, :score => s }
          end
  
          print (concept.coherence/c.total_coherence).to_s+" <= "
          p concept.elements.collect { |c| c.word }
        end
      end
  
      sc.sort { |a,b| b[1] <=> a[1] }
    end
  
    def Context.label_candidate query,index,nb_candidates,rm3=false
  #    Mirimiri::WikipediaPage.search_wikipedia_titles query  
      args = rm3 ? "-fbDocs=20 -fbTerms=30 -fbMu=2000 -fbOrigWeight=0.7" : ""
      q = Indri::IndriQuery.new({:query => query, :count => nb_candidates},"-printDocuments=true -trecFormat=true #{args}")
      index = Indri::IndriIndex.new IndexPaths[index.to_sym]
      docs = index.runquery q
      docs = docs.force_encoding("ISO-8859-1").encode("UTF-8") if ['web_fr','web_en','web_nospam'].include? index
      idocs = Indri::IndriPrintedDocuments.new(docs)
  
      wiki_titles = idocs.extract_docs.collect do |d|
        t = Nokogiri::HTML d
        t.xpath('//title').text
      end
  
      wiki_titles
    end
  
    def Context.lcm query
      source = 'nyt'
  
      a = Time.now
      qc = QueryContext.new(1.upto(20).collect do |nb_docs|
        beg = Time.now
        c = ConceptModel.new query,source,nb_docs
        puts "#{nb_docs} ==> Time elapsed: #{Time.now-beg} seconds" 
        c
      end)
      puts "All concepts : #{Time.now-a} seconds"
  
      model = qc.best_concept_model
      puts "Total : #{Time.now-a} seconds"
      model
    end
  
    def Context.term_context index_path,query,size,num_page,args={}
      terms    = self.term_concepts index_path,query,size,num_page,args
      args[:window] ||= 1
  
  #    context = "#weight ( #{terms.compact.sort{ |a,b| b[0] <=> a[0]}[0,size].collect { |e| "#{e[0]} #1(#{e[1]})" }.join " "} ) " unless terms.empty?
      context = "#weight ( #{terms.collect { |c| "#{"%.10f" % c[:score]} #uw#{args[:window]}(#{c[:concept]})" }.join " "} ) " unless terms.empty?
  
      context
    end
  
  # From SIGIR'06 paper : `Improving the estimation of relevance models using large external corpora`
  #
    def Context.morm index_path,query,size,num_page
      docs,scores,names = self.feedback_docs  index_path,query,num_page
  
      terms = []
  
      docs.each do |d|
        r = Mirimiri::Document.new d
        tmp = self.extract_ngrams r,:tf,1
        terms += tmp.compact.collect { |t| [t[0]*Math.exp(scores[docs.index(d)].to_f),t[1]] }
      end
  
      final = terms.compact.sort{ |a,b| b[0] <=> a[0]}[0,size].collect { |e| { :score => e[0], :concept => e[1] } }
      context = "#weight ( #{final.collect { |c| "#{"%.10f" % c[:score]} #1(#{c[:concept]})" }.join " "} ) " unless terms.empty?
  
      context
    end
  
    def Context.term_concepts index_path,query,size,num_page,args={}
      args[:func]   ||= :entropy
      args[:window] ||= 1
  
      docs     = self.feedback_docs  index_path,query,num_page
  
      resource = Mirimiri::Document.new docs.join(' ')
      terms    = self.extract_ngrams resource,args[:func].to_sym,args[:window]
  
      terms.compact.sort{ |a,b| b[0] <=> a[0]}[0,size].collect { |e| { :score => e[0], :concept => e[1] } }
    end
  
  
    def Context.sentence_similarity s1,s2,index_path
      q = s1.is_a?(String) ? s1.split : s1
      r = s2.is_a?(String) ? s2.split : s2
  
      inter = q & r
  
      s = (inter.count/q.count.to_f) * inter.inject(0.0) { |sum,w| sum + Math.log(Context.df index_path,w) }
      s
    end
  
  
    private
  
    def Context.df index_path,w,window=1
      if @@count[index_path]["total#{window}"].nil?
        total = `dumpindex #{index_path} s`.match(/total terms:\t(.*)/)[1].to_f-(window-1).to_f
        @@semaphore.synchronize {
          @@count[index_path]["total#{window}"] = total
        }
      end
  
      if @@df[index_path]["#uw#{window}(#{w})"].nil?
        nb = `dumpindex #{index_path} e "#uw#{window}(#{w})" | awk ' { arr[$1]=$0 } END { for ( key in arr ) { print arr[key] } } ' | wc -l`.chomp.split(':').last.to_f - 1
        @@semaphore.synchronize {
          @@df[index_path]["#uw#{window}(#{w})"] = nb+1.0 
        }
      end
      begin
      d = @@count[index_path]["total#{window}"]/@@df[index_path]["#uw#{window}(#{w})"]
      rescue
        puts w
      exit
      end
      d
    end
  
    def Context.prob_w index_path,w,window=1
      if @@count[index_path]["total#{window}"].nil?
        total = `dumpindex #{index_path} s`.match(/total terms:\t(.*)/)[1].to_f-(window-1).to_f
        @@semaphore.synchronize {
          @@count[index_path]["total#{window}"] = total+1.0
        }
      end
  
      nb = self.count_w index_path,w,window
      nb/@@count[index_path]["total#{window}"]
    end
  
    def Context.count_w index_path,w,window=1
      if @@count[index_path]["##{window}(#{w})"].nil?
        nb = `dumpindex #{index_path} x "##{window}(#{w})"`.chomp.split(':').last.to_f 
        @@semaphore.synchronize {
          @@count[index_path]["##{window}(#{w})"] = ("%.15f" % nb).to_f+1.0
        }
      end
      @@count[index_path]["##{window}(#{w})"]
    end
  
  
    public
    def Context.extract_ngrams resource,func,n
      raw_terms = 1.upto(n).collect      { |i| resource.ngrams(i) }.flatten
  #    raw_terms = resource.ngrams(n).flatten
      terms     = raw_terms.uniq.collect { |w| [resource.send(func.to_sym,w), w.unaccent] unless w.is_stopword? || w.split.any? { |e| e.length <= 2 } || w.split.any? { |e| e !~ /[a-zA-Z]/ } || w.include?(".") || (Mirimiri::Stoplist&w.unaccent.split).count >= 2 }
  #    terms     = raw_terms.uniq.collect { |w| w=w.gsub(/\W/,' ').strip; [resource.send(func.to_sym,w), w.unaccent] unless w.is_stopword? || w.split.any? { |e| e.length <= 2 } || w.split.any? { |e| e !~ /[a-zA-Z]/ } || w.include?(".") || (Mirimiri::Stoplist&w.unaccent.split).count >= 1 }
  #    terms     = raw_terms.uniq.collect { |w| [resource.send(func.to_sym,w), w.unaccent] unless w.is_stopword? || w.split.all? { |e| e.length <= 1 } || w.split.all? { |e| e !~ /[a-zA-Z]/ } || w.include?(".") }
      terms
    end
  
    def Context.feedback_docs index_path,query,num_page
      query = Indri::IndriQuery.new({:query => query, :count => num_page},"-printDocuments=true -trecFormat=true")
      index = Indri::IndriIndex.new index_path
      idocs = Indri::IndriPrintedDocuments.new(index.runquery(query).force_encoding("ISO-8859-1").encode("UTF-8"))
  
      texts,scores,names = idocs.extract_docs_score
  
      docs = texts.collect do |idoc| 
        begin
          Sanitize.clean idoc,:remove_contents => ['script','style']
        rescue
          d = Nokogiri::HTML(idoc)
          d.xpath('//text()').text
        end
      end
  
      return docs,scores,names
    end
  
  end