train_raw_dnn.py
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#!/usr/bin/env python
# Copyright 2016 Vijayaditya Peddinti.
# 2016 Vimal Manohar
# Apache 2.0.
""" This script is similar to steps/nnet3/train_dnn.py but trains a
raw neural network instead of an acoustic model.
"""
from __future__ import print_function
from __future__ import division
import argparse
import logging
import pprint
import os
import sys
import traceback
sys.path.insert(0, 'steps')
import libs.nnet3.train.common as common_train_lib
import libs.common as common_lib
import libs.nnet3.train.frame_level_objf as train_lib
import libs.nnet3.report.log_parse as nnet3_log_parse
logger = logging.getLogger('libs')
logger.setLevel(logging.INFO)
handler = logging.StreamHandler()
handler.setLevel(logging.INFO)
formatter = logging.Formatter("%(asctime)s [%(pathname)s:%(lineno)s - "
"%(funcName)s - %(levelname)s ] %(message)s")
handler.setFormatter(formatter)
logger.addHandler(handler)
logger.info('Starting raw DNN trainer (train_raw_dnn.py)')
def get_args():
""" Get args from stdin.
The common options are defined in the object
libs.nnet3.train.common.CommonParser.parser.
See steps/libs/nnet3/train/common.py
"""
parser = argparse.ArgumentParser(
description="""Trains a feed forward raw DNN (without transition model)
using frame-level objectives like cross-entropy and mean-squared-error.
DNNs include simple DNNs, TDNNs and CNNs.""",
formatter_class=argparse.ArgumentDefaultsHelpFormatter,
conflict_handler='resolve',
parents=[common_train_lib.CommonParser(include_chunk_context=False).parser])
# egs extraction options
parser.add_argument("--egs.frames-per-eg", type=int, dest='frames_per_eg',
default=8,
help="Number of output labels per example")
parser.add_argument("--image.augmentation-opts", type=str,
dest='image_augmentation_opts',
default=None,
help="Image augmentation options")
# trainer options
parser.add_argument("--trainer.input-model", type=str,
dest='input_model', default=None,
action=common_lib.NullstrToNoneAction,
help="""If specified, this model is used as initial
raw model (0.raw in the script) instead of initializing
the model from xconfig. Configs dir is not expected to
exist and left/right context is computed from this
model.""")
parser.add_argument("--trainer.prior-subset-size", type=int,
dest='prior_subset_size', default=20000,
help="Number of samples for computing priors")
parser.add_argument("--trainer.num-jobs-compute-prior", type=int,
dest='num_jobs_compute_prior', default=10,
help="The prior computation jobs are single "
"threaded and run on the CPU")
# Parameters for the optimization
parser.add_argument("--trainer.optimization.minibatch-size",
type=str, dest='minibatch_size', default='512',
help="""Size of the minibatch used in SGD training
(argument to nnet3-merge-egs); may be a more general
rule as accepted by the --minibatch-size option of
nnet3-merge-egs; run that program without args to see
the format.""")
parser.add_argument("--compute-average-posteriors",
type=str, action=common_lib.StrToBoolAction,
choices=["true", "false"], default=False,
help="""If true, then the average output of the
network is computed and dumped as post.final.vec""")
# General options
parser.add_argument("--nj", type=int, default=4,
help="Number of parallel jobs")
parser.add_argument("--use-dense-targets", type=str,
action=common_lib.StrToBoolAction,
default=True, choices=["true", "false"],
help="Train neural network using dense targets")
parser.add_argument("--feat-dir", type=str, required=False,
help="Directory with features used for training "
"the neural network.")
parser.add_argument("--targets-scp", type=str, required=False,
help="""Targets for training neural network.
This is a kaldi-format SCP file of target matrices.
<utterance-id> <extended-filename-of-target-matrix>.
The target matrix's column dim must match
the neural network output dim, and the
row dim must match the number of output frames
i.e. after subsampling if "--frame-subsampling-factor"
option is passed to --egs.opts.""")
parser.add_argument("--dir", type=str, required=True,
help="Directory to store the models and "
"all other files.")
print(' '.join(sys.argv))
print(sys.argv)
args = parser.parse_args()
[args, run_opts] = process_args(args)
return [args, run_opts]
def process_args(args):
""" Process the options got from get_args()
"""
if args.frames_per_eg < 1:
raise Exception("--egs.frames-per-eg should have a minimum value of 1")
if not common_train_lib.validate_minibatch_size_str(args.minibatch_size):
raise Exception("--trainer.optimization.minibatch-size has an invalid value")
if (not os.path.exists(args.dir)):
raise Exception("Directory specified with --dir={0} "
"does not exist.".format(args.dir))
if (not os.path.exists(args.dir + "/configs") and
(args.input_model is None or not os.path.exists(args.input_model))):
raise Exception("Either --trainer.input-model option should be supplied, "
"and exist; or the {0}/configs directory should exist."
"{0}/configs is the output of make_configs.py"
"".format(args.dir))
# set the options corresponding to args.use_gpu
run_opts = common_train_lib.RunOpts()
if args.use_gpu in ["true", "false"]:
args.use_gpu = ("yes" if args.use_gpu == "true" else "no")
if args.use_gpu in ["yes", "wait"]:
if not common_lib.check_if_cuda_compiled():
logger.warning(
"""You are running with one thread but you have not compiled
for CUDA. You may be running a setup optimized for GPUs.
If you have GPUs and have nvcc installed, go to src/ and do
./configure; make""")
run_opts.train_queue_opt = "--gpu 1"
run_opts.parallel_train_opts = "--use-gpu={}".format(args.use_gpu)
run_opts.combine_gpu_opt = "--use-gpu={}".format(args.use_gpu)
run_opts.combine_queue_opt = "--gpu 1"
run_opts.prior_gpu_opt = "--use-gpu={}".format(args.use_gpu)
run_opts.prior_queue_opt = "--gpu 1"
else:
logger.warning("Without using a GPU this will be very slow. "
"nnet3 does not yet support multiple threads.")
run_opts.train_queue_opt = ""
run_opts.parallel_train_opts = "--use-gpu=no"
run_opts.combine_gpu_opt = "--use-gpu=no"
run_opts.combine_queue_opt = ""
run_opts.prior_gpu_opt = "--use-gpu=no"
run_opts.prior_queue_opt = ""
run_opts.command = args.command
run_opts.egs_command = (args.egs_command
if args.egs_command is not None else
args.command)
run_opts.num_jobs_compute_prior = args.num_jobs_compute_prior
return [args, run_opts]
def train(args, run_opts):
""" The main function for training.
Args:
args: a Namespace object with the required parameters
obtained from the function process_args()
run_opts: RunOpts object obtained from the process_args()
"""
arg_string = pprint.pformat(vars(args))
logger.info("Arguments for the experiment\n{0}".format(arg_string))
# Set some variables.
# note, feat_dim gets set to 0 if args.feat_dir is unset (None).
feat_dim = common_lib.get_feat_dim(args.feat_dir)
ivector_dim = common_lib.get_ivector_dim(args.online_ivector_dir)
ivector_id = common_lib.get_ivector_extractor_id(args.online_ivector_dir)
config_dir = '{0}/configs'.format(args.dir)
var_file = '{0}/vars'.format(config_dir)
if args.input_model is None:
config_dir = '{0}/configs'.format(args.dir)
var_file = '{0}/vars'.format(config_dir)
variables = common_train_lib.parse_generic_config_vars_file(var_file)
else:
# If args.input_model is specified, the model left and right contexts
# are computed using input_model.
variables = common_train_lib.get_input_model_info(args.input_model)
# Set some variables.
try:
model_left_context = variables['model_left_context']
model_right_context = variables['model_right_context']
except KeyError as e:
raise Exception("KeyError {0}: Variables need to be defined in "
"{1}".format(str(e), '{0}/configs'.format(args.dir)))
left_context = model_left_context
right_context = model_right_context
# Initialize as "raw" nnet, prior to training the LDA-like preconditioning
# matrix. This first config just does any initial splicing that we do;
# we do this as it's a convenient way to get the stats for the 'lda-like'
# transform.
if (args.stage <= -4) and os.path.exists(args.dir+"/configs/init.config") and \
(args.input_model is None):
logger.info("Initializing the network for computing the LDA stats")
common_lib.execute_command(
"""{command} {dir}/log/nnet_init.log \
nnet3-init --srand=-2 {dir}/configs/init.config \
{dir}/init.raw""".format(command=run_opts.command,
dir=args.dir))
default_egs_dir = '{0}/egs'.format(args.dir)
if (args.stage <= -3) and args.egs_dir is None:
if args.targets_scp is None or args.feat_dir is None:
raise Exception("If you don't supply the --egs-dir option, the "
"--targets-scp and --feat-dir options are required.")
logger.info("Generating egs")
if args.use_dense_targets:
target_type = "dense"
try:
num_targets = int(variables['num_targets'])
if (common_lib.get_feat_dim_from_scp(args.targets_scp)
!= num_targets):
raise Exception("Mismatch between num-targets provided to "
"script vs configs")
except KeyError as e:
num_targets = -1
else:
target_type = "sparse"
try:
num_targets = int(variables['num_targets'])
except KeyError as e:
raise Exception("KeyError {0}: Variables need to be defined "
"in {1}".format(
str(e), '{0}/configs'.format(args.dir)))
train_lib.raw_model.generate_egs_using_targets(
data=args.feat_dir, targets_scp=args.targets_scp,
egs_dir=default_egs_dir,
left_context=left_context, right_context=right_context,
run_opts=run_opts,
frames_per_eg_str=str(args.frames_per_eg),
srand=args.srand,
egs_opts=args.egs_opts,
cmvn_opts=args.cmvn_opts,
online_ivector_dir=args.online_ivector_dir,
samples_per_iter=args.samples_per_iter,
stage=args.egs_stage,
target_type=target_type,
num_targets=num_targets)
if args.egs_dir is None:
egs_dir = default_egs_dir
else:
egs_dir = args.egs_dir
[egs_left_context, egs_right_context,
frames_per_eg_str, num_archives] = (
common_train_lib.verify_egs_dir(egs_dir, feat_dim,
ivector_dim, ivector_id,
left_context, right_context))
assert str(args.frames_per_eg) == frames_per_eg_str
if args.num_jobs_final > num_archives:
raise Exception('num_jobs_final cannot exceed the number of archives '
'in the egs directory')
# copy the properties of the egs to dir for
# use during decoding
common_train_lib.copy_egs_properties_to_exp_dir(egs_dir, args.dir)
if args.stage <= -2 and os.path.exists(args.dir+"/configs/init.config") and \
(args.input_model is None):
logger.info('Computing the preconditioning matrix for input features')
train_lib.common.compute_preconditioning_matrix(
args.dir, egs_dir, num_archives, run_opts,
max_lda_jobs=args.max_lda_jobs,
rand_prune=args.rand_prune)
if args.stage <= -1:
logger.info("Preparing the initial network.")
common_train_lib.prepare_initial_network(args.dir, run_opts, args.srand, args.input_model)
# set num_iters so that as close as possible, we process the data
# $num_epochs times, i.e. $num_iters*$avg_num_jobs) ==
# $num_epochs*$num_archives, where
# avg_num_jobs=(num_jobs_initial+num_jobs_final)/2.
num_archives_expanded = num_archives * args.frames_per_eg
num_archives_to_process = int(args.num_epochs * num_archives_expanded)
num_archives_processed = 0
num_iters = int((num_archives_to_process * 2) / (args.num_jobs_initial + args.num_jobs_final))
# If do_final_combination is True, compute the set of models_to_combine.
# Otherwise, models_to_combine will be none.
if args.do_final_combination:
models_to_combine = common_train_lib.get_model_combine_iters(
num_iters, args.num_epochs,
num_archives_expanded, args.max_models_combine,
args.num_jobs_final)
else:
models_to_combine = None
if os.path.exists('{0}/valid_diagnostic.scp'.format(egs_dir)):
if os.path.exists('{0}/valid_diagnostic.egs'.format(egs_dir)):
raise Exception('both {0}/valid_diagnostic.egs and '
'{0}/valid_diagnostic.scp exist.'
'This script expects only one of them to exist.'
''.format(egs_dir))
use_multitask_egs = True
else:
if not os.path.exists('{0}/valid_diagnostic.egs'.format(egs_dir)):
raise Exception('neither {0}/valid_diagnostic.egs nor '
'{0}/valid_diagnostic.scp exist.'
'This script expects one of them.'
''.format(egs_dir))
use_multitask_egs = False
logger.info("Training will run for {0} epochs = "
"{1} iterations".format(args.num_epochs, num_iters))
for iter in range(num_iters):
if (args.exit_stage is not None) and (iter == args.exit_stage):
logger.info("Exiting early due to --exit-stage {0}".format(iter))
return
current_num_jobs = common_train_lib.get_current_num_jobs(
iter, num_iters,
args.num_jobs_initial, args.num_jobs_step, args.num_jobs_final)
if args.stage <= iter:
lrate = common_train_lib.get_learning_rate(iter, current_num_jobs,
num_iters,
num_archives_processed,
num_archives_to_process,
args.initial_effective_lrate,
args.final_effective_lrate)
shrinkage_value = 1.0 - (args.proportional_shrink * lrate)
if shrinkage_value <= 0.5:
raise Exception("proportional-shrink={0} is too large, it gives "
"shrink-value={1}".format(args.proportional_shrink,
shrinkage_value))
percent = num_archives_processed * 100.0 / num_archives_to_process
epoch = (num_archives_processed * args.num_epochs
/ num_archives_to_process)
shrink_info_str = ''
if shrinkage_value != 1.0:
shrink_info_str = 'shrink: {0:0.5f}'.format(shrinkage_value)
logger.info("Iter: {0}/{1} Jobs: {2} "
"Epoch: {3:0.2f}/{4:0.1f} ({5:0.1f}% complete) "
"lr: {6:0.6f} {7}".format(iter, num_iters - 1,
current_num_jobs,
epoch, args.num_epochs,
percent,
lrate, shrink_info_str))
train_lib.common.train_one_iteration(
dir=args.dir,
iter=iter,
srand=args.srand,
egs_dir=egs_dir,
num_jobs=current_num_jobs,
num_archives_processed=num_archives_processed,
num_archives=num_archives,
learning_rate=lrate,
dropout_edit_string=common_train_lib.get_dropout_edit_string(
args.dropout_schedule,
float(num_archives_processed) / num_archives_to_process,
iter),
train_opts=' '.join(args.train_opts),
minibatch_size_str=args.minibatch_size,
frames_per_eg=args.frames_per_eg,
momentum=args.momentum,
max_param_change=args.max_param_change,
shrinkage_value=shrinkage_value,
shuffle_buffer_size=args.shuffle_buffer_size,
run_opts=run_opts,
get_raw_nnet_from_am=False,
image_augmentation_opts=args.image_augmentation_opts,
use_multitask_egs=use_multitask_egs,
backstitch_training_scale=args.backstitch_training_scale,
backstitch_training_interval=args.backstitch_training_interval)
if args.cleanup:
# do a clean up everything but the last 2 models, under certain
# conditions
common_train_lib.remove_model(
args.dir, iter-2, num_iters, models_to_combine,
args.preserve_model_interval,
get_raw_nnet_from_am=False)
if args.email is not None:
reporting_iter_interval = num_iters * args.reporting_interval
if iter % reporting_iter_interval == 0:
# lets do some reporting
[report, times, data] = (
nnet3_log_parse.generate_acc_logprob_report(args.dir))
message = report
subject = ("Update : Expt {dir} : "
"Iter {iter}".format(dir=args.dir, iter=iter))
common_lib.send_mail(message, subject, args.email)
num_archives_processed = num_archives_processed + current_num_jobs
if args.stage <= num_iters:
if args.do_final_combination:
logger.info("Doing final combination to produce final.raw")
train_lib.common.combine_models(
dir=args.dir, num_iters=num_iters,
models_to_combine=models_to_combine, egs_dir=egs_dir,
minibatch_size_str=args.minibatch_size, run_opts=run_opts,
get_raw_nnet_from_am=False,
max_objective_evaluations=args.max_objective_evaluations,
use_multitask_egs=use_multitask_egs)
else:
common_lib.force_symlink("{0}.raw".format(num_iters),
"{0}/final.raw".format(args.dir))
if args.compute_average_posteriors and args.stage <= num_iters + 1:
logger.info("Getting average posterior for output-node 'output'.")
train_lib.common.compute_average_posterior(
dir=args.dir, iter='final', egs_dir=egs_dir,
num_archives=num_archives,
prior_subset_size=args.prior_subset_size, run_opts=run_opts,
get_raw_nnet_from_am=False)
if args.cleanup:
logger.info("Cleaning up the experiment directory "
"{0}".format(args.dir))
remove_egs = args.remove_egs
if args.egs_dir is not None:
# this egs_dir was not created by this experiment so we will not
# delete it
remove_egs = False
common_train_lib.clean_nnet_dir(
nnet_dir=args.dir, num_iters=num_iters, egs_dir=egs_dir,
preserve_model_interval=args.preserve_model_interval,
remove_egs=remove_egs,
get_raw_nnet_from_am=False)
# do some reporting
outputs_list = common_train_lib.get_outputs_list("{0}/final.raw".format(
args.dir), get_raw_nnet_from_am=False)
if 'output' in outputs_list:
[report, times, data] = nnet3_log_parse.generate_acc_logprob_report(
args.dir)
if args.email is not None:
common_lib.send_mail(report, "Update : Expt {0} : "
"complete".format(args.dir),
args.email)
with open("{dir}/accuracy.{output_name}.report".format(dir=args.dir,
output_name="output"),
"w") as f:
f.write(report)
common_lib.execute_command("steps/info/nnet3_dir_info.pl "
"{0}".format(args.dir))
def main():
[args, run_opts] = get_args()
try:
train(args, run_opts)
common_lib.wait_for_background_commands()
except BaseException as e:
# look for BaseException so we catch KeyboardInterrupt, which is
# what we get when a background thread dies.
if args.email is not None:
message = ("Training session for experiment {dir} "
"died due to an error.".format(dir=args.dir))
common_lib.send_mail(message, message, args.email)
if not isinstance(e, KeyboardInterrupt):
traceback.print_exc()
sys.exit(1)
if __name__ == "__main__":
main()