train_raw_rnn.py
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#!/usr/bin/env python
# Copyright 2016 Vijayaditya Peddinti.
# 2016 Vimal Manohar
# 2017 Johns Hopkins University (author: Daniel Povey)
# Apache 2.0.
""" This script is similar to steps/nnet3/train_rnn.py but trains a
raw neural network instead of an acoustic model.
"""
from __future__ import print_function
from __future__ import division
import argparse
import logging
import pprint
import os
import sys
import traceback
sys.path.insert(0, 'steps')
import libs.nnet3.train.common as common_train_lib
import libs.common as common_lib
import libs.nnet3.train.frame_level_objf as train_lib
import libs.nnet3.report.log_parse as nnet3_log_parse
logger = logging.getLogger('libs')
logger.setLevel(logging.INFO)
handler = logging.StreamHandler()
handler.setLevel(logging.INFO)
formatter = logging.Formatter("%(asctime)s [%(pathname)s:%(lineno)s - "
"%(funcName)s - %(levelname)s ] %(message)s")
handler.setFormatter(formatter)
logger.addHandler(handler)
logger.info('Starting RNN trainer (train_raw_rnn.py)')
def get_args():
""" Get args from stdin.
The common options are defined in the object
libs.nnet3.train.common.CommonParser.parser.
See steps/libs/nnet3/train/common.py
"""
parser = argparse.ArgumentParser(
description="""Trains a raw RNN (without transition model) using
frame-level objectives like cross-entropy and mean-squared-error.
RNNs include LSTMs, BLSTMs and GRUs.
RNN acoustic model training differs from feed-forward DNN training in
the following ways
1. RNN acoustic models train on output chunks rather than
individual outputs
2. The training includes additional stage of shrinkage, where the
parameters of the model are scaled when the derivative averages
at the non-linearities are below a threshold.
3. RNNs can also be trained with state preservation training""",
formatter_class=argparse.ArgumentDefaultsHelpFormatter,
conflict_handler='resolve',
parents=[common_train_lib.CommonParser(default_chunk_left_context=40).parser])
# egs extraction options
parser.add_argument("--egs.chunk-width", type=str, dest='chunk_width',
default="20",
help="""Number of frames per chunk in the examples
used to train the RNN. Caution: if you double this you
should halve --trainer.samples-per-iter. May be
a comma-separated list of alternatives: first width
is the 'principal' chunk-width, used preferentially""")
# trainer options
parser.add_argument("--trainer.input-model", type=str,
dest='input_model', default=None,
action=common_lib.NullstrToNoneAction,
help="""If specified, this model is used as initial
raw model (0.raw in the script) instead of initializing
the model from xconfig. Configs dir is not expected to
exist and left/right context is computed from this
model.""")
parser.add_argument("--trainer.samples-per-iter", type=int,
dest='samples_per_iter', default=20000,
help="""This is really the number of egs in each
archive. Each eg has 'chunk_width' frames in it--
for chunk_width=20, this value (20k) is equivalent
to the 400k number that we use as a default in
regular DNN training.
Overrides the default value in CommonParser.""")
parser.add_argument("--trainer.prior-subset-size", type=int,
dest='prior_subset_size', default=20000,
help="Number of samples for computing priors")
parser.add_argument("--trainer.num-jobs-compute-prior", type=int,
dest='num_jobs_compute_prior', default=10,
help="The prior computation jobs are single "
"threaded and run on the CPU")
# Parameters for the optimization
parser.add_argument("--trainer.optimization.momentum", type=float,
dest='momentum', default=0.5,
help="""Momentum used in update computation.
Note: we implemented it in such a way that
it doesn't increase the effective learning rate.
Overrides the default value in CommonParser""")
parser.add_argument("--trainer.optimization.shrink-value", type=float,
dest='shrink_value', default=0.99,
help="""Scaling factor used for scaling the parameter
matrices when the derivative averages are below the
shrink-threshold at the non-linearities. E.g. 0.99.
Only applicable when the neural net contains sigmoid or
tanh units.""")
parser.add_argument("--trainer.optimization.shrink-saturation-threshold",
type=float,
dest='shrink_saturation_threshold', default=0.40,
help="""Threshold that controls when we apply the
'shrinkage' (i.e. scaling by shrink-value). If the
saturation of the sigmoid and tanh nonlinearities in
the neural net (as measured by
steps/nnet3/get_saturation.pl) exceeds this threshold
we scale the parameter matrices with the
shrink-value.""")
# RNN specific trainer options
parser.add_argument("--trainer.rnn.num-chunk-per-minibatch", type=str,
dest='num_chunk_per_minibatch', default='100',
help="""Number of sequences to be processed in
parallel every minibatch. May be a more general
rule as accepted by the --minibatch-size option of
nnet3-merge-egs; run that program without args to see
the format.""")
parser.add_argument("--trainer.deriv-truncate-margin", type=int,
dest='deriv_truncate_margin', default=8,
help="""Margin (in input frames) around the 'required'
part of each chunk that the derivatives are
backpropagated to. E.g., 8 is a reasonable setting.
Note: the 'required' part of the chunk is defined by
the model's {left,right}-context.""")
parser.add_argument("--compute-average-posteriors",
type=str, action=common_lib.StrToBoolAction,
choices=["true", "false"], default=False,
help="""If true, then the average output of the
network is computed and dumped as post.final.vec""")
# General options
parser.add_argument("--nj", type=int, default=4,
help="Number of parallel jobs")
parser.add_argument("--use-dense-targets", type=str,
action=common_lib.StrToBoolAction,
default=True, choices=["true", "false"],
help="Train neural network using dense targets")
parser.add_argument("--feat-dir", type=str, required=True,
help="Directory with features used for training "
"the neural network.")
parser.add_argument("--targets-scp", type=str, required=True,
help="Target for training neural network.")
parser.add_argument("--dir", type=str, required=True,
help="Directory to store the models and "
"all other files.")
print(' '.join(sys.argv))
print(sys.argv)
args = parser.parse_args()
[args, run_opts] = process_args(args)
return [args, run_opts]
def process_args(args):
""" Process the options got from get_args()
"""
if not common_train_lib.validate_chunk_width(args.chunk_width):
raise Exception("--egs.chunk-width has an invalid value")
if not common_train_lib.validate_minibatch_size_str(args.num_chunk_per_minibatch):
raise Exception("--trainer.rnn.num-chunk-per-minibatch has an invalid value")
if args.chunk_left_context < 0:
raise Exception("--egs.chunk-left-context should be non-negative")
if args.chunk_right_context < 0:
raise Exception("--egs.chunk-right-context should be non-negative")
if (not os.path.exists(args.dir)):
raise Exception("Directory specified with --dir={0} "
"does not exist.".format(args.dir))
if (not os.path.exists(args.dir + "/configs") and
(args.input_model is None or not os.path.exists(args.input_model))):
raise Exception("Either --trainer.input-model option should be supplied, "
"and exist; or the {0}/configs directory should exist."
"{0}/configs is the output of make_configs.py"
"".format(args.dir))
# set the options corresponding to args.use_gpu
run_opts = common_train_lib.RunOpts()
if args.use_gpu in ["true", "false"]:
args.use_gpu = ("yes" if args.use_gpu == "true" else "no")
if args.use_gpu in ["yes", "wait"]:
if not common_lib.check_if_cuda_compiled():
logger.warning(
"""You are running with one thread but you have not compiled
for CUDA. You may be running a setup optimized for GPUs.
If you have GPUs and have nvcc installed, go to src/ and do
./configure; make""")
run_opts.train_queue_opt = "--gpu 1"
run_opts.parallel_train_opts = "--use-gpu={}".format(args.use_gpu)
run_opts.combine_gpu_opt = "--use-gpu={}".format(args.use_gpu)
run_opts.combine_queue_opt = "--gpu 1"
run_opts.prior_gpu_opt = "--use-gpu={}".format(args.use_gpu)
run_opts.prior_queue_opt = "--gpu 1"
else:
logger.warning("Without using a GPU this will be very slow. "
"nnet3 does not yet support multiple threads.")
run_opts.train_queue_opt = ""
run_opts.parallel_train_opts = "--use-gpu=no"
run_opts.combine_gpu_opt = "--use-gpu=no"
run_opts.combine_queue_opt = ""
run_opts.prior_gpu_opt = "--use-gpu=no"
run_opts.prior_queue_opt = ""
run_opts.command = args.command
run_opts.egs_command = (args.egs_command
if args.egs_command is not None else
args.command)
run_opts.num_jobs_compute_prior = args.num_jobs_compute_prior
return [args, run_opts]
def train(args, run_opts):
""" The main function for training.
Args:
args: a Namespace object with the required parameters
obtained from the function process_args()
run_opts: RunOpts object obtained from the process_args()
"""
arg_string = pprint.pformat(vars(args))
logger.info("Arguments for the experiment\n{0}".format(arg_string))
# Set some variables.
feat_dim = common_lib.get_feat_dim(args.feat_dir)
ivector_dim = common_lib.get_ivector_dim(args.online_ivector_dir)
ivector_id = common_lib.get_ivector_extractor_id(args.online_ivector_dir)
if args.input_model is None:
config_dir = '{0}/configs'.format(args.dir)
var_file = '{0}/vars'.format(config_dir)
variables = common_train_lib.parse_generic_config_vars_file(var_file)
else:
# If args.input_model is specified, the model left and right contexts
# are computed using input_model.
variables = common_train_lib.get_input_model_info(args.input_model)
# Set some variables.
try:
model_left_context = variables['model_left_context']
model_right_context = variables['model_right_context']
except KeyError as e:
raise Exception("KeyError {0}: Variables need to be defined in "
"{1}".format(str(e), '{0}/configs'.format(args.dir)))
left_context = args.chunk_left_context + model_left_context
right_context = args.chunk_right_context + model_right_context
left_context_initial = (args.chunk_left_context_initial + model_left_context if
args.chunk_left_context_initial >= 0 else -1)
right_context_final = (args.chunk_right_context_final + model_right_context if
args.chunk_right_context_final >= 0 else -1)
# Initialize as "raw" nnet, prior to training the LDA-like preconditioning
# matrix. This first config just does any initial splicing that we do;
# we do this as it's a convenient way to get the stats for the 'lda-like'
# transform.
if (args.stage <= -4) and os.path.exists(args.dir+"/configs/init.config") and \
(args.input_model is None):
logger.info("Initializing the network for computing the LDA stats")
common_lib.execute_command(
"""{command} {dir}/log/nnet_init.log \
nnet3-init --srand=-2 {dir}/configs/init.config \
{dir}/init.raw""".format(command=run_opts.command,
dir=args.dir))
default_egs_dir = '{0}/egs'.format(args.dir)
if (args.stage <= -3) and args.egs_dir is None:
logger.info("Generating egs")
if args.use_dense_targets:
target_type = "dense"
try:
num_targets = int(variables['num_targets'])
if (common_lib.get_feat_dim_from_scp(args.targets_scp)
!= num_targets):
raise Exception("Mismatch between num-targets provided to "
"script vs configs")
except KeyError as e:
num_targets = -1
else:
target_type = "sparse"
try:
num_targets = int(variables['num_targets'])
except KeyError as e:
raise Exception("KeyError {0}: Variables need to be defined "
"in {1}".format(
str(e), '{0}/configs'.format(args.dir)))
train_lib.raw_model.generate_egs_using_targets(
data=args.feat_dir, targets_scp=args.targets_scp,
egs_dir=default_egs_dir,
left_context=left_context,
right_context=right_context,
left_context_initial=left_context_initial,
right_context_final=right_context_final,
run_opts=run_opts,
frames_per_eg_str=args.chunk_width,
srand=args.srand,
egs_opts=args.egs_opts,
cmvn_opts=args.cmvn_opts,
online_ivector_dir=args.online_ivector_dir,
samples_per_iter=args.samples_per_iter,
stage=args.egs_stage,
target_type=target_type,
num_targets=num_targets)
if args.egs_dir is None:
egs_dir = default_egs_dir
else:
egs_dir = args.egs_dir
[egs_left_context, egs_right_context,
frames_per_eg_str, num_archives] = (
common_train_lib.verify_egs_dir(egs_dir, feat_dim,
ivector_dim, ivector_id,
left_context, right_context,
left_context_initial,
right_context_final))
if args.chunk_width != frames_per_eg_str:
raise Exception("mismatch between --egs.chunk-width and the frames_per_eg "
"in the egs dir {0} vs {1}".format(args.chunk_width,
frames_per_eg_str))
if args.num_jobs_final > num_archives:
raise Exception('num_jobs_final cannot exceed the number of archives '
'in the egs directory')
# copy the properties of the egs to dir for
# use during decoding
common_train_lib.copy_egs_properties_to_exp_dir(egs_dir, args.dir)
if args.stage <= -2 and os.path.exists(args.dir+"/configs/init.config") and \
(args.input_model is None):
logger.info('Computing the preconditioning matrix for input features')
train_lib.common.compute_preconditioning_matrix(
args.dir, egs_dir, num_archives, run_opts,
max_lda_jobs=args.max_lda_jobs,
rand_prune=args.rand_prune)
if args.stage <= -1:
logger.info("Preparing the initial network.")
common_train_lib.prepare_initial_network(args.dir, run_opts, args.srand, args.input_model)
# set num_iters so that as close as possible, we process the data
# $num_epochs times, i.e. $num_iters*$avg_num_jobs) ==
# $num_epochs*$num_archives, where
# avg_num_jobs=(num_jobs_initial+num_jobs_final)/2.
num_archives_to_process = int(args.num_epochs * num_archives)
num_archives_processed = 0
num_iters = int((num_archives_to_process * 2) / (args.num_jobs_initial + args.num_jobs_final))
# If do_final_combination is True, compute the set of models_to_combine.
# Otherwise, models_to_combine will be none.
if args.do_final_combination:
models_to_combine = common_train_lib.get_model_combine_iters(
num_iters, args.num_epochs,
num_archives, args.max_models_combine,
args.num_jobs_final)
else:
models_to_combine = None
if (os.path.exists('{0}/valid_diagnostic.scp'.format(egs_dir))):
if (os.path.exists('{0}/valid_diagnostic.egs'.format(egs_dir))):
raise Exception('both {0}/valid_diagnostic.egs and '
'{0}/valid_diagnostic.scp exist.'
'This script expects only one of them to exist.'
''.format(egs_dir))
use_multitask_egs = True
else:
if (not os.path.exists('{0}/valid_diagnostic.egs'
''.format(egs_dir))):
raise Exception('neither {0}/valid_diagnostic.egs nor '
'{0}/valid_diagnostic.scp exist.'
'This script expects one of them.'
''.format(egs_dir))
use_multitask_egs = False
min_deriv_time = None
max_deriv_time_relative = None
if args.deriv_truncate_margin is not None:
min_deriv_time = -args.deriv_truncate_margin - model_left_context
max_deriv_time_relative = \
args.deriv_truncate_margin + model_right_context
logger.info("Training will run for {0} epochs = "
"{1} iterations".format(args.num_epochs, num_iters))
for iter in range(num_iters):
if (args.exit_stage is not None) and (iter == args.exit_stage):
logger.info("Exiting early due to --exit-stage {0}".format(iter))
return
current_num_jobs = common_train_lib.get_current_num_jobs(
iter, num_iters,
args.num_jobs_initial, args.num_jobs_step, args.num_jobs_final)
if args.stage <= iter:
model_file = "{dir}/{iter}.raw".format(dir=args.dir, iter=iter)
lrate = common_train_lib.get_learning_rate(iter, current_num_jobs,
num_iters,
num_archives_processed,
num_archives_to_process,
args.initial_effective_lrate,
args.final_effective_lrate)
# shrinkage_value is a scale on the parameters.
shrinkage_value = 1.0 - (args.proportional_shrink * lrate)
if shrinkage_value <= 0.5:
raise Exception("proportional-shrink={0} is too large, it gives "
"shrink-value={1}".format(args.proportional_shrink,
shrinkage_value))
if args.shrink_value < shrinkage_value:
shrinkage_value = (args.shrink_value
if common_train_lib.should_do_shrinkage(
iter, model_file,
args.shrink_saturation_threshold,
get_raw_nnet_from_am=False)
else shrinkage_value)
percent = num_archives_processed * 100.0 / num_archives_to_process
epoch = (num_archives_processed * args.num_epochs
/ num_archives_to_process)
shrink_info_str = ''
if shrinkage_value != 1.0:
shrink_info_str = 'shrink: {0:0.5f}'.format(shrinkage_value)
logger.info("Iter: {0}/{1} Jobs: {2} "
"Epoch: {3:0.2f}/{4:0.1f} ({5:0.1f}% complete) "
"lr: {6:0.6f} {7}".format(iter, num_iters - 1,
current_num_jobs,
epoch, args.num_epochs,
percent,
lrate, shrink_info_str))
train_lib.common.train_one_iteration(
dir=args.dir,
iter=iter,
srand=args.srand,
egs_dir=egs_dir,
num_jobs=current_num_jobs,
num_archives_processed=num_archives_processed,
num_archives=num_archives,
learning_rate=lrate,
dropout_edit_string=common_train_lib.get_dropout_edit_string(
args.dropout_schedule,
float(num_archives_processed) / num_archives_to_process,
iter),
train_opts=' '.join(args.train_opts),
shrinkage_value=shrinkage_value,
minibatch_size_str=args.num_chunk_per_minibatch,
min_deriv_time=min_deriv_time,
max_deriv_time_relative=max_deriv_time_relative,
momentum=args.momentum,
max_param_change=args.max_param_change,
shuffle_buffer_size=args.shuffle_buffer_size,
run_opts=run_opts,
get_raw_nnet_from_am=False,
use_multitask_egs=use_multitask_egs,
compute_per_dim_accuracy=args.compute_per_dim_accuracy)
if args.cleanup:
# do a clean up everythin but the last 2 models, under certain
# conditions
common_train_lib.remove_model(
args.dir, iter-2, num_iters, models_to_combine,
args.preserve_model_interval,
get_raw_nnet_from_am=False)
if args.email is not None:
reporting_iter_interval = num_iters * args.reporting_interval
if iter % reporting_iter_interval == 0:
# lets do some reporting
[report, times, data] = (
nnet3_log_parse.generate_acc_logprob_report(args.dir))
message = report
subject = ("Update : Expt {dir} : "
"Iter {iter}".format(dir=args.dir, iter=iter))
common_lib.send_mail(message, subject, args.email)
num_archives_processed = num_archives_processed + current_num_jobs
if args.stage <= num_iters:
if args.do_final_combination:
logger.info("Doing final combination to produce final.raw")
train_lib.common.combine_models(
dir=args.dir, num_iters=num_iters,
models_to_combine=models_to_combine, egs_dir=egs_dir,
minibatch_size_str=args.num_chunk_per_minibatch,
run_opts=run_opts, chunk_width=args.chunk_width,
get_raw_nnet_from_am=False,
compute_per_dim_accuracy=args.compute_per_dim_accuracy,
max_objective_evaluations=args.max_objective_evaluations,
use_multitask_egs=use_multitask_egs)
else:
common_lib.force_symlink("{0}.raw".format(num_iters),
"{0}/final.raw".format(args.dir))
if args.compute_average_posteriors and args.stage <= num_iters + 1:
logger.info("Getting average posterior for purposes of "
"adjusting the priors.")
train_lib.common.compute_average_posterior(
dir=args.dir, iter='final', egs_dir=egs_dir,
num_archives=num_archives,
prior_subset_size=args.prior_subset_size, run_opts=run_opts,
get_raw_nnet_from_am=False)
if args.cleanup:
logger.info("Cleaning up the experiment directory "
"{0}".format(args.dir))
remove_egs = args.remove_egs
if args.egs_dir is not None:
# this egs_dir was not created by this experiment so we will not
# delete it
remove_egs = False
common_train_lib.clean_nnet_dir(
nnet_dir=args.dir, num_iters=num_iters, egs_dir=egs_dir,
preserve_model_interval=args.preserve_model_interval,
remove_egs=remove_egs,
get_raw_nnet_from_am=False)
# do some reporting
[report, times, data] = nnet3_log_parse.generate_acc_logprob_report(args.dir)
if args.email is not None:
common_lib.send_mail(report, "Update : Expt {0} : "
"complete".format(args.dir), args.email)
with open("{dir}/accuracy.report".format(dir=args.dir), "w") as f:
f.write(report)
common_lib.execute_command("steps/info/nnet3_dir_info.pl "
"{0}".format(args.dir))
def main():
[args, run_opts] = get_args()
try:
train(args, run_opts)
common_lib.wait_for_background_commands()
except BaseException as e:
# look for BaseException so we catch KeyboardInterrupt, which is
# what we get when a background thread dies.
if args.email is not None:
message = ("Training session for experiment {dir} "
"died due to an error.".format(dir=args.dir))
common_lib.send_mail(message, message, args.email)
if not isinstance(e, KeyboardInterrupt):
traceback.print_exc()
sys.exit(1)
if __name__ == "__main__":
main()