mergeWlat.pl
5.57 KB
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
#!/usr/bin/perl
use lib "$ENV{'LIA_UTIL_PACK'}/script/perlmod";
use Utils;
use strict;
use warnings;
use File::Basename;
#-------------------------------------------
# MAIN
#-------------------------------------------
# options variables
my $help = 0;
my $inDir = ".";
my $outDir = ".";
my $inExt = "wlat";
my $outWlat = "mwlat";
my $outWlatInf = "mwlatinf";
my $timeSill = 3*100;
# usefull variables
my @filesList;
my %mergedHash;
# Parse options and print usage if there is a syntax
# error, or if usage was explicitly requested
GetOptions('help|?' => \$help,
'inDir=s' => \$inDir,
'inExt=s' => \$inExt,
'timeSill=s' => \$timeSill,
'outDir=s' => \$outDir,
'outWlatExt=s' => \$outWlat,
'outWlatInfoExt=s' => \$outWlatInf);
# Options test
pod2usage(1) if($help);
Utils::fill_array_from_dir($inDir, $inExt, \@filesList);
#
# on trie les wlat par le temps (suite temporelle)
#
@filesList = sort wlat_sort @filesList;
my $previousEnd;
my $currentMergedWlat;
my @currentWlatTimeTab;
foreach my $wlatFile (@filesList){
#
# recuperer a partir du nom du fichier wlat les information temporelle de debut et fin
#
@currentWlatTimeTab = obtainWlatTimeInfo($wlatFile);
#
# on recuperer le nombre de noeud du reseau de confusion (ligne 2)
#
my $nbNodes;
my $file;
open($file, $wlatFile) or die("Cannot open file : $wlatFile");
my $cpt = 1;
while(<$file>){
if($cpt == 2){
my @splittedLine = split(/ /, $_);
$nbNodes = $splittedLine[1];
}
if($cpt == 3){
last;
}
$cpt++;
}
die("Error : no nodes number\n") if(!$nbNodes);
#
# si on est au debut ou si le temps separant deux wlat successifs excede le seuil de temps fixe
# => creation d'une nouvelle entree
#
if(!$previousEnd || $currentWlatTimeTab[0] - $previousEnd > $timeSill){
$currentMergedWlat = $wlatFile;
#
# si on est dans le second cas on creer les fichiers utiles
#
if($previousEnd){
saveMerge($currentWlatTimeTab, $previousEnd, $mergedHash{$currentMergedWlat})
}
#
# recupere le nom du fichier sans extension ni chemin => sert de cles
#
my $wlatFileBasename = basename($wlatFile, ".".$inExt);
$currentMergedWlat = $wlatFileBasename;
if(exists $mergedHash{$currentMergedWlat}){
die("error : $currentMergedWlat appear 2 times");
} else{
#
# creation de la structure adequate :
# tab :
# - 0 : nb de noeuds dans le reseau
# - 1 : contenu du reseau
# - 2 : information pour identifier les composantes du reseau de conf merge
#
my @contentTab = ();
my $lastNode = $nbNodes - 1;
my @infoTab = ("$wlatFile 0 $lastNode\n");
my @tab = ($nbNodes, \@contentTab, \@infoTab);
$mergedHash{$currentMergedWlat} = \@tab;
}
} else{
my $newInitNode = ${$mergedHash{$currentMergedWlat}}[0];
my $newLastNode = $newInitNode + $nbNodes - 1;
#
# ajout du nombre de nodes qui vont etre rajoutes
# et du champ de couverture (en terme de noeud)
#
${$mergedHash{$currentMergedWlat}}[0] += $nbNodes;
push(@{${$mergedHash{$currentMergedWlat}}[2]}, "$wlatFile $newInitNode $newLastNode\n");
}
while(<$file>){
#
# on recupere la ligne sauf les deux premiers champs (<=> `align <nb_node>`)
#
$_ =~ /(.+) (.+) (.+)$/;
push(@{${$mergedHash{$currentMergedWlat}}[1]}, $3);
}
close($file);
}
#
# pour le dernier fichier - creation des derniers fichiers
#
saveMerge($currentMergedWlat, $currentWlatTimeTab[1], $mergedHash{$currentMergedWlat})
#-------------------------------------------
# SUB-ROUTINES
#-------------------------------------------
#
# \brief recuperation des informations temporelles contenues dans le nom du fichier (temps de debut + temps de fin)
# tab :
# -0 : temps de debut
# -1 ; temps de fin
#
sub obtainWlatTimeInfo{
my ($fileName) = @_;
my @splitedFileName= split(/#/, $fileName);
my @splitedTimeInfo= split(/:/, $splitedFileName[1]);
return ($splitedTimeInfo[0], $splittedTimeInfo[0]+$splitedTimeInfo[1]);
}
#
# \brief creation des fichiers mwlat et mwlatinfo
#
sub saveMerge{
my ($fileName, $newEnd, $specialTab) = @_;
#
# creation du nom du fichier de sortie
# show#<beginTime>:<newDuration (= newEndTime - beginTimei)>
#
my @splittedFileName = split(/:/, $fileName);
my @initialInfo = obtainWlatTimeInfo($fileName);
my $newDuration = $newEnd - $initialInfo[0];
my $newFileBasename = "$splittedFileName[0]:$newDuration";
#
# creation du ficher wlat
#
my $mwlatFile;
open($mwlatFile, ">$outDir/$newFileBasename.$outWlatExt");
print $mwlatFile "name $fileName\n";
print $mwlatFile "numaligns ${$specialTab}[0]\n";
print $mwlatFile "posteriors 1\n";
my $node = 0;
foreach my $mwlatContent (@{${$specialTab}[1]}) {
print $mwlatFile "align $node $mwlatContent";
$node++;
}
close($mwlatFile);
#
# creation du fichier wlatinfo
#
my $mwlatInfoFile,
open($mwlatInfoFile, ">$outDir/$newFileBasename.$outWlatInfoExt");
foreach my $mwlatInfoContent (@{${$specialTab}[2]}){
print $mwlatInfoFile $mwlatInfoContent;
}
close($mwlatInfoFile);
}
#
# \brief tri des ficher wlat en fonction du temps
#
sub wlat_sort
{
my @afmt = split(/#/, $a);
my @bfmt = split(/#/, $b);
my @subafmt = split(/:/, $afmt[1]);
my @subbfmt = split(/:/, $bfmt[1]);
$subafmt[0] <=> $subbfmt[0];
}
=head1 NAME
mergeWlat.pl - merge cowalt
=head1 SYNOPSIS
mergeWlat.pl [options]
Options:
-help|? brief help message
-inDir input dir containing wlat files (default .)
-inExt wlat file extension (default wlat)
-sill time sill used to merge wlat file
-outDir output dir will contain merged wlat files (default .)
-outWlatExt output merged wlat file extension (default mwlat)
-outWlatInfoExt output merged wlat information file extension (default mwlatinf)