pretrain_dbn.sh
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#!/bin/bash
# Copyright 2013 Karel Vesely
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# THIS CODE IS PROVIDED *AS IS* BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
# KIND, EITHER EXPRESS OR IMPLIED, INCLUDING WITHOUT LIMITATION ANY IMPLIED
# WARRANTIES OR CONDITIONS OF TITLE, FITNESS FOR A PARTICULAR PURPOSE,
# MERCHANTABLITY OR NON-INFRINGEMENT.
# See the Apache 2 License for the specific language governing permissions and
# limitations under the License.
# To be run from ..
#
# Deep Belief Network pre-training by Contrastive Divergence (CD-1) algorithm.
# The script can pre-train on plain features (ie. saved fMLLR features),
# or modified features (CMN, delta).
# The script creates feature-transform in nnet format, which contains splice
# and shift+scale (zero mean and unit variance on DBN input).
#
# For special cases it is possible to use external feature-transform.
#
# Begin configuration.
#
# nnet config
nn_depth=6 #number of hidden layers
hid_dim=2048 #number of units per layer
# number of iterations
rbm_iter=1 #number of pre-training epochs (Gaussian-Bernoulli RBM has 2x more)
rbm_drop_data=0.0 #sample the training set, 1.0 drops all the data, 0.0 keeps all
# pre-training opts
rbm_lrate=0.4 #RBM learning rate
rbm_lrate_low=0.01 #lower RBM learning rate (for Gaussian units)
rbm_l2penalty=0.0002 #L2 penalty (increases RBM-mixing rate)
rbm_extra_opts=
# data processing config
copy_feats=true # resave the features randomized consecutively to tmpdir
# feature config
feature_transform= # Optionally reuse feature processing front-end (override splice,etc.)
delta_order= # Optionally use deltas on the input features
apply_cmvn=false # Optionally do CMVN of the input features
norm_vars=false # When apply_cmvn=true, this enables CVN
splice=5 # Temporal splicing
splice_step=1 # Stepsize of the splicing (1 is consecutive splice,
# value 2 would do [ -10 -8 -6 -4 -2 0 2 4 6 8 10 ] splicing)
# misc.
verbose=1 # enable per-cache reports
# gpu config
use_gpu_id= # manually select GPU id to run on, (-1 disables GPU)
# End configuration.
echo "$0 $@" # Print the command line for logging
[ -f path.sh ] && . ./path.sh;
. parse_options.sh || exit 1;
if [ $# != 2 ]; then
echo "Usage: $0 <data> <exp-dir>"
echo " e.g.: $0 data/train exp/rbm_pretrain"
echo "main options (for others, see top of script file)"
echo " --config <config-file> # config containing options"
echo ""
echo " --nn-depth <N> # number of RBM layers"
echo " --hid-dim <N> # number of hidden units per layer"
echo " --rbm-iter <N> # number of CD-1 iterations per layer"
echo " --dbm-drop-data <float> # probability of frame-dropping,"
echo " # can be used to subsample large datasets"
echo " --rbm-lrate <float> # learning-rate for Bernoulli-Bernoulli RBMs"
echo " --rbm-lrate-low <float> # learning-rate for Gaussian-Bernoulli RBM"
echo ""
echo " --copy-feats <bool> # copy features to /tmp, to accelerate training"
echo " --apply-cmvn <bool> # normalize input features (opt.)"
echo " --norm-vars <bool> # use variance normalization (opt.)"
echo " --splice <N> # splice +/-N frames of input features"
exit 1;
fi
data=$1
dir=$2
for f in $data/feats.scp; do
[ ! -f $f ] && echo "$0: no such file $f" && exit 1;
done
echo "# INFO"
echo "$0 : Pre-training Deep Belief Network as a stack of RBMs"
printf "\t dir : $dir \n"
printf "\t Train-set : $data \n"
[ -e $dir/${nn_depth}.dbn ] && echo "$0 Skipping, already have $dir/${nn_depth}.dbn" && exit 0
mkdir -p $dir/log
###### PREPARE FEATURES ######
echo
echo "# PREPARING FEATURES"
# shuffle the list
echo "Preparing train/cv lists"
cat $data/feats.scp | utils/shuffle_list.pl --srand ${seed:-777} > $dir/train.scp
# print the list size
wc -l $dir/train.scp
#re-save the shuffled features, so they are stored sequentially on the disk in /tmp/
if [ "$copy_feats" == "true" ]; then
tmpdir=$(mktemp -d); mv $dir/train.scp $dir/train.scp_non_local
utils/nnet/copy_feats.sh $dir/train.scp_non_local $tmpdir $dir/train.scp
#remove data on exit...
trap "echo \"Removing features tmpdir $tmpdir @ $(hostname)\"; rm -r $tmpdir" EXIT
fi
#create a 10k utt subset for global cmvn estimates
head -n 10000 $dir/train.scp > $dir/train.scp.10k
###### PREPARE FEATURE PIPELINE ######
#read the features
feats="ark:copy-feats scp:$dir/train.scp ark:- |"
#optionally add per-speaker CMVN
if [ $apply_cmvn == "true" ]; then
echo "Will use CMVN statistics : $data/cmvn.scp"
[ ! -r $data/cmvn.scp ] && echo "Cannot find cmvn stats $data/cmvn.scp" && exit 1;
cmvn="scp:$data/cmvn.scp"
feats="$feats apply-cmvn --print-args=false --norm-vars=$norm_vars --utt2spk=ark:$data/utt2spk $cmvn ark:- ark:- |"
# keep track of norm_vars option
echo "$norm_vars" >$dir/norm_vars
else
echo "apply_cmvn disabled (per speaker norm. on input features)"
fi
#optionally add deltas
if [ "$delta_order" != "" ]; then
feats="$feats add-deltas --delta-order=$delta_order ark:- ark:- |"
echo "$delta_order" > $dir/delta_order
fi
#get feature dim
echo -n "Getting feature dim : "
feat_dim=$(feat-to-dim --print-args=false scp:$dir/train.scp -)
echo $feat_dim
# Now we will start building feature_transform which will
# be applied in CUDA to gain more speed.
#
# We will use 1GPU for both feature_transform and MLP training in one binary tool.
# This is against the kaldi spirit, but it is necessary, because on some sites a GPU
# cannot be shared accross by two or more processes (compute exclusive mode),
# and we would like to use single GPU per training instance,
# so that the grid resources can be used efficiently...
if [ ! -z "$feature_transform" ]; then
echo Using already prepared feature_transform: $feature_transform
cp $feature_transform $dir/final.feature_transform
else
# Generate the splice transform
echo "Using splice +/- $splice , step $splice_step"
feature_transform=$dir/tr_splice$splice-$splice_step.nnet
utils/nnet/gen_splice.py --fea-dim=$feat_dim --splice=$splice --splice-step=$splice_step > $feature_transform
# Renormalize the MLP input to zero mean and unit variance
feature_transform_old=$feature_transform
feature_transform=${feature_transform%.nnet}_cmvn-g.nnet
echo "Renormalizing MLP input features into $feature_transform"
nnet-forward ${use_gpu_id:+ --use-gpu-id=$use_gpu_id} \
$feature_transform_old "$(echo $feats | sed 's|train.scp|train.scp.10k|')" \
ark:- 2>$dir/log/cmvn_glob_fwd.log |\
compute-cmvn-stats ark:- - | cmvn-to-nnet - - |\
nnet-concat --binary=false $feature_transform_old - $feature_transform
# MAKE LINK TO THE FINAL feature_transform, so the other scripts will find it ######
[ -f $dir/final.feature_transform ] && unlink $dir/final.feature_transform
(cd $dir; ln -s $(basename $feature_transform) final.feature_transform )
fi
###### GET THE DIMENSIONS ######
num_fea=$(feat-to-dim --print-args=false "$feats nnet-forward --use-gpu-id=-1 $feature_transform ark:- ark:- |" - 2>/dev/null)
num_hid=$hid_dim
###### PERFORM THE PRE-TRAINING ######
for depth in $(seq 1 $nn_depth); do
echo
echo "# PRE-TRAINING RBM LAYER $depth"
RBM=$dir/$depth.rbm
[ -f $RBM ] && echo "RBM '$RBM' already trained, skipping." && continue
#The first RBM needs special treatment, because of Gussian input nodes
if [ "$depth" == "1" ]; then
#This is Gaussian-Bernoulli RBM
#initialize
echo "Initializing '$RBM.init'"
utils/nnet/gen_rbm_init.py --dim=${num_fea}:${num_hid} --gauss --vistype=gauss --hidtype=bern > $RBM.init || exit 1
#pre-train
echo "Pretraining '$RBM' (reduced lrate and 2x more iters)"
rbm-train-cd1-frmshuff --learn-rate=$rbm_lrate_low --l2-penalty=$rbm_l2penalty \
--num-iters=$((2*$rbm_iter)) --drop-data=$rbm_drop_data --verbose=$verbose \
--feature-transform=$feature_transform \
${use_gpu_id:+ --use-gpu-id=$use_gpu_id} $rbm_extra_opts \
$RBM.init "$feats" $RBM 2>$dir/log/rbm.$depth.log || exit 1
else
#This is Bernoulli-Bernoulli RBM
#cmvn stats for init
echo "Computing cmvn stats '$dir/$depth.cmvn' for RBM initialization"
if [ ! -f $dir/$depth.cmvn ]; then
nnet-forward ${use_gpu_id:+ --use-gpu-id=$use_gpu_id} \
"nnet-concat $feature_transform $dir/$((depth-1)).dbn - |" \
"$(echo $feats | sed 's|train.scp|train.scp.10k|')" \
ark:- 2>$dir/log/cmvn_fwd.$depth.log | \
compute-cmvn-stats ark:- - 2>$dir/log/cmvn.$depth.log | \
cmvn-to-nnet - $dir/$depth.cmvn || exit 1
else
echo compute-cmvn-stats already done, skipping.
fi
#initialize
echo "Initializing '$RBM.init'"
utils/nnet/gen_rbm_init.py --dim=${num_hid}:${num_hid} --gauss --vistype=bern --hidtype=bern --cmvn-nnet=$dir/$depth.cmvn > $RBM.init || exit 1
#pre-train
echo "Pretraining '$RBM'"
rbm-train-cd1-frmshuff --learn-rate=$rbm_lrate --l2-penalty=$rbm_l2penalty \
--num-iters=$rbm_iter --drop-data=$rbm_drop_data --verbose=$verbose \
--feature-transform="nnet-concat $feature_transform $dir/$((depth-1)).dbn - |" \
${use_gpu_id:+ --use-gpu-id=$use_gpu_id} $rbm_extra_opts \
$RBM.init "$feats" $RBM 2>$dir/log/rbm.$depth.log || exit 1
fi
#Create DBN stack
if [ "$depth" == "1" ]; then
rbm-convert-to-nnet --binary=true $RBM $dir/$depth.dbn
else
rbm-convert-to-nnet --binary=true $RBM - | \
nnet-concat $dir/$((depth-1)).dbn - $dir/$depth.dbn
fi
done
echo
echo "# REPORT"
echo "# RBM pre-training progress (line per-layer)"
grep progress $dir/log/rbm.*.log
echo
echo "Pre-training finished."
sleep 3
exit 0