choose_features.py
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#!/usr/bin/env python3
# Copyright 2017 Jian Wang
# License: Apache 2.0.
import os
import argparse
import sys
import math
from collections import defaultdict
sys.stdout = open(1, 'w', encoding='utf-8', closefd=False)
import re
parser = argparse.ArgumentParser(description="This script chooses the sparse feature representation of words. "
"To be more specific, it chooses the set of features-- you compute "
"them for the specific words by calling rnnlm/get_word_features.py.",
epilog="E.g. " + sys.argv[0] + " --unigram-probs=exp/rnnlm/unigram_probs.txt "
"--unigram-scale=0.1 "
"data/rnnlm/vocab/words.txt > exp/rnnlm/features.txt",
formatter_class=argparse.ArgumentDefaultsHelpFormatter)
parser.add_argument("--unigram-probs", type=str, default='', required=True,
help="Specify the file containing unigram probs.")
parser.add_argument("--min-ngram-order", type=int, default=2,
help="minimum length of n-grams of characters to"
"make potential features.")
parser.add_argument("--max-ngram-order", type=int, default=3,
help="maximum length of n-grams of characters to"
"make potential features.")
parser.add_argument("--min-frequency", type=float, default=1.0e-05,
help="minimum frequency with which an n-gram character "
"feature is encountered (counted as binary presence in a word times unigram "
"probs of words), for it to be used as a feature. e.g. "
"if less than 1.0e-06 of tokens contain the n-gram 'xyz', "
"then it wouldn't be used as a feature.")
parser.add_argument("--include-unigram-feature", type=str, default='true',
choices=['true', 'false'],
help="If true, the unigram frequency of a word is "
"one of the features. [note: one reason we "
"want to include this, is to make it easier to "
"port models to new vocabularies and domains].")
parser.add_argument("--include-length-feature", type=str, default='true',
choices=['true', 'false'],
help="If true, the length in characters of a word is one of the features.")
parser.add_argument("--top-word-features", type=int, default=2000,
help="The most frequent n words each get their own "
"special feature, in addition to any other features "
"that the word may naturally get.")
parser.add_argument("--special-words", type=str, default='<s>,</s>,<brk>',
help="List of special words that get their own special "
"features and do not get any other features.")
parser.add_argument("--use-constant-feature", type=str, default="false",
help="If set to true, we give a constant feature to all "
"words (to help model offsets). The value will equal "
"the --max-feature-rms option.");
parser.add_argument("--max-feature-rms", type=float, default=0.01,
help="maximum allowed root-mean-square value for any feature.")
# dir=exp/rnnlm_tdnn_d
# paste <(awk '{print $2}' $dir/config/unigram_probs.txt) <(awk '{$1="";print;}' $dir/word_feats.txt ) | awk '{freq=$1; num_feats=(NF-1)/2; for (n=1;n<=num_feats;n++) { a=n*2; b=n*2+1; rms[$a] += freq * $b*$b; }} END{for(k in rms) { print k, rms[k];}}' | sort -k2 -nr | head
# 7180 9.99985e-05
# 7019 9.99947e-05
# ..
parser.add_argument("vocab_file",
help="Path for vocab file")
args = parser.parse_args()
if args.use_constant_feature != "false" and args.use_constant_feature != "true":
sys.exit(sys.argv[0] + ": --use-constant-feature must be true or false: {0}".format(
args.use_constant_feature))
if args.min_ngram_order < 1:
sys.exit(sys.argv[0] + ": --min-ngram-order must be at least 1.")
if args.max_ngram_order < args.min_ngram_order:
sys.exit(sys.argv[0] + ": --max-ngram-order must be larger than or equal to --min-ngram-order.")
SPECIAL_SYMBOLS = ["<eps>", "<s>", "<brk>"]
# read the vocabulay file
# Returns a pair (vocab, wordlist)
# where 'vocab' is a dict mapping the string-valued word to a integer id.
# and 'wordlist' is a list indexed by integer id, that returns the string-valued word.
def read_vocab(vocab_file):
vocab = {}
with open(vocab_file, 'r', encoding="utf-8") as f:
for line in f:
fields = line.split()
assert len(fields) == 2
if fields[0] in vocab:
sys.exit(sys.argv[0] + ": duplicated word({0}) in vocab: {1}"
.format(fields[0], vocab_file))
vocab[fields[0]] = int(fields[1])
# check there is no duplication and no gap among word ids
sorted_ids = sorted(vocab.values())
for idx, id in enumerate(sorted_ids):
assert idx == id
vocab_size = 1 + max(vocab.values())
wordlist = [ None] * vocab_size
for word, index in vocab.items():
assert wordlist[index] is None
wordlist[index] = word
if wordlist[0] != '<eps>' and wordlist[0] != '<EPS>':
sys.exit(sys.argv[0] + ": expected word numbered zero to be epsilon.")
return (vocab, wordlist)
# read the unigram probs; returns a list indexed by integer
# id of the word, which evaluates to the unigram prob of the word.
def read_unigram_probs(unigram_probs_file):
unigram_probs = []
with open(unigram_probs_file, 'r', encoding="utf-8") as f:
for line in f:
fields = line.split()
assert len(fields) == 2
idx = int(fields[0])
if idx >= len(unigram_probs):
unigram_probs.extend([None] * (idx - len(unigram_probs) + 1))
unigram_probs[idx] = float(fields[1])
for prob in unigram_probs:
assert prob is not None
return unigram_probs
def get_feature_scale(rms):
if rms > args.max_feature_rms:
return '%.2g' % (args.max_feature_rms / rms)
else:
return "1.0"
(vocab, wordlist) = read_vocab(args.vocab_file)
unigram_probs = read_unigram_probs(args.unigram_probs)
assert len(unigram_probs) == len(wordlist)
# num_features is a counter used to keep track of how many features
# we've created so far.
num_features = 0
# The constant feature; this will be a line of the form
# <feature-index> constant feature-value
# e.g.
# constant 0.01
# which means every single word gets this feature. It is used to
# handle offsets of the words' log-likelihoods, so we don't have
# to include an offset term in the math.
if args.use_constant_feature == "true":
print("{0}\tconstant\t{1}".format(num_features,
args.max_feature_rms))
num_features += 1
# 'word_indexes_to_exclude' will contain the integer indexes of words that are
# in 'args.special_words' plus the zero word (epsilon) and which don't take part
# in later-numbered features.
word_indexes_to_exclude = {0} # a set including only zero.
# Features for 'special' words, i.e. a line of the form
# <feature-index> special <word> <feature-value>
# e.g.:
# 2 special </s> 1.0
# These words get just the constant feature (if present) and their own 'special'
# feature, but not letter-based features, because things like '<s>' are
# special symbols that are not treated as regular words.
if args.special_words != '':
for word in args.special_words.split(','):
if not word in vocab:
sys.exit(sys.argv[0] + ": error: element {0} of --special-words option "
"is not in the vocabulary file {1}".format(word, args.vocab_file))
word_indexes_to_exclude.add(vocab[word])
this_word_prob = unigram_probs[vocab[word]]
rms = math.sqrt(this_word_prob)
print("{0}\tspecial\t{1}\t{2}".format(num_features, word,
get_feature_scale(rms)))
num_features += 1
# Print a line for the unigram feature (this is a feature that's a scaled,
# offset version of the log-unigram-prob of the word). The line is of the form:
# <feature-index> unigram <offset> <scale>
# e.g.
# 3 unigram 0.04631 0.024312
# where the interpretation is that if a word w has unigram probability p(w), the
# feature's value will equal <offset> + <scale> * log(p(w)).
# The offset and scale are chosen so that the expected value of the feature
# is zero and its rms value equals args.max_feature_rms.
if args.include_unigram_feature == 'true':
total_p = 0.0 # total probability of words that have the unigram feature,
# i.e. excluding words with the 'special' feature.
total_x = 0.0
total_x2 = 0.0
for idx, p in enumerate(unigram_probs):
if p > 0.0 and idx not in word_indexes_to_exclude:
# 'feature_value' is the value of the log-unigram-prob feature
# before the offset and scale are accounted for. We accumulate
# the expected x and x^2 stats of this.
feature_value = math.log(p)
total_p += p
total_x += p * feature_value
total_x2 += p * feature_value * feature_value
# we won't allow all the words to be 'special' words.
# total_p is the probability mass of non-special words.
assert total_p > 0 and total_p < 1.01
mean = total_x / total_p
variance = (total_x2 / total_p - mean * mean)
# The following assert is because training an RNNLM with only one
# 'non-special' word and the unigram feature (or using the unigram feature
# where all unigram probs are the same) does not make sense.
assert variance > 0
# The mean is computed over those words where the feature was present..
# 'stddev' is computed over all words, even when the feature was not present
# (that's what the factor of 'total_p' is about); this is consistent with
# how we apply the args.max_feature_rms option in general.
stddev = math.sqrt(total_p * variance)
scale = min(args.max_feature_rms / stddev, 1.0)
offset = -mean * scale
print("{0}\tunigram\t{1}\t{2}".format(num_features, offset, scale))
num_features += 1
# length feature. This feature is the length of the word, scaled
# down so that the rms does not exceed args.max_feature_rms.
# The format of the line is:
# <feature-index> length <scale>
# e.g.:
# 4 length 0.00518
if args.include_length_feature == 'true':
feature_sumsq = 0.0
for word_index, p in enumerate(unigram_probs):
if word_index not in word_indexes_to_exclude:
word = wordlist[word_index]
feature_value = len(word)
feature_sumsq += p * feature_value * feature_value
rms = math.sqrt(feature_sumsq)
print("{0}\tlength\t{1}".format(num_features, get_feature_scale(rms)))
num_features += 1
# top-words features. This is a feature that we assign to the top n most
# frequent words (e.g. the top 2000 most frequent words), *in addition* to any
# features they may get as a result of their written form.
# e.g. the line will look like:
# <feature-index> word <word> <scale>
# e.g.:
# 6 word of 1.0
# We need to remember which words are given these features to avoid printing
# the same feature later on when we process the n-gram type features; for
# instance, if we are including trigrams on characters, the 3-gram (BOS, a, EOS)
# would be the word "a", and if the word "a" got its own "word" feature due to
# the --top-word-features option, this would be a duplication.
# 'top_words' will be a set containing words (strings) that already had their
# own 'word' feature.
top_words = set()
if args.top_word_features > 0:
# sorted_word_indexes is a sorted list of pairs (word_index, unigram_prob),
# sorted from greatest to least unigram_prob.
sorted_word_indexes = sorted(enumerate(unigram_probs),
key=lambda x: x[1], reverse=True)
num_top_words_printed = 0
for word_index, unigram_prob in sorted_word_indexes:
if word_index in word_indexes_to_exclude:
continue
word = wordlist[word_index]
rms = math.sqrt(unigram_prob)
print("{0}\tword\t{1}\t{2}".format(num_features, word, get_feature_scale(rms)))
num_features += 1
top_words.add(word)
num_top_words_printed += 1
if num_top_words_printed > args.top_word_features:
break
# n-gram features.
# These are basically sub-strings of a word. What we print in the feature
# file is things like:
# <feat-index> (initial|final|match|word) <sub-string> <scale>
# e.g.
# 20 match tel 1.0
# where: 'match' means a match at any position in the word,
# 'final' means a match that must be word-final (and may or may
# not be word-initial),
# 'initial' means a match that must be word-initial (and may or
# may not be word-final)
# 'word' means a match that is both word-initial and word-final.
# For a given word, the feature value if there is a match will be the number of
# matches times the feature scale.
# 'ngram_feats' is a dict mapping a pair (match_type, match)
# to a pair (feat_freq, expected_feat_sumsq), where:
#
# match_type (a string) is one of: 'match', 'final', 'initial', 'word',
# describing the match type, as explained above.
# match (a string) is the string that we are matching, e.g. 'ing'.
# feat_freq (a float) is the sum over all words which the feature
# appears in, of the probability of that word.
# expected_feat_sumsq (a float) is the sum over all words of the probability
# of that word, times the square of the number of times the feature
# appears there.
# if you index ngram_feats with a key that wasn't present, you'll get the
# tuple (0.0, 0.0).
ngram_feats = defaultdict(lambda: (0.0, 0.0))
for (word_index, unigram_prob) in enumerate(unigram_probs):
if word_index in word_indexes_to_exclude:
continue
word = wordlist[word_index]
for pos in range(len(word) + 1): # +1 for EOW 'this_word_feats' is a dict
# from pairs (match_type, match) as defined above, to the count of the
# number of times the feature was matched in this word (this count can
# only be >1 if match_type == 'match').
this_word_feats = defaultdict(int)
for order in range(args.min_ngram_order, args.max_ngram_order + 1):
start = pos - order + 1
end = pos + 1
if start < -1:
continue
if start < 0 and end > len(word):
match_type = 'word'
start = 0
end = len(word)
elif start < 0:
match_type = 'initial'
start = 0
elif end > len(word):
match_type = 'final'
end = len(word)
else:
match_type = 'match'
if start >= end:
continue
match = word[start:end]
this_word_feats[(match_type, match)] += 1
for (match_type, match), count in this_word_feats.items():
(feat_freq, expected_feat_sumsq) = ngram_feats[(match_type, match)]
ngram_feats[(match_type, match)] = (feat_freq + unigram_prob,
expected_feat_sumsq + unigram_prob * count * count)
for (match_type, match), (expected_feat_sum, expected_feat_sumsq) in sorted(ngram_feats.items()):
if match_type == 'word' and match in top_words:
continue # avoid duplicate
if expected_feat_sum < args.min_frequency:
continue # very infrequent features are excluded via this mechanism.
rms = math.sqrt(expected_feat_sumsq)
print("{0}\t{1}\t{2}\t{3}".format(
num_features, match_type, match, get_feature_scale(rms)))
num_features += 1
print(sys.argv[0] + ": chose {0} features.".format(num_features), file=sys.stderr)